Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1934 ATGAAAGAGGAAGATCAATATTCCATCAACAACAACAACAACAACTTCCACCATACCTATCATCACCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCTACTTCAACAACAAATCATGATTCAACAACAACAGAGCATGATGTTCCCTAATTCATCTATACCTTCTGACCAAGCAATCTCCTCTGCTTCTCCATGGCCCAATAACATCCCACAATACCCTGCTTTCAATAACCATCATCCTCACTTTCTTCAACCTCCTTCTAATTCATCATCACTACCTTATGCAACCTTCTTCAACAACAACAACAGAAGGGTCGGTGTTCCTTCTATGCATCACCAGTTTGCATCATCATCATATGAGGGTCCTTCAACCAATGATCATCTGAGGATCATATCAGAGACACTTCAGCATCATCATCATCATCATCATCAAGGGGTAGTGGGTCCCTTTGGGCTACAAGCAGAGATAGGGAAGATGACAGCGCAAGAAATCATGGAGGCGAAGGCTCTTGCTGCTTCCAAGAGTCACAGTGAAGCTGAGAGGAGGCGCAGAGAGAGGATCAATAACCATCTTGCCAAGCTCCGCACTTTGTTGCCCAGCACTACCAAAACAGATAAGGCATCGTTACTAGCAGAAGTGATTCAACACGTGAAGGAACTAAAGCGACAAACATCAGTGATAGCAGAGACAAGCCCAGTCCCAACGGAATCGGACGAACTAACAGTGGATGATGCATCCGACGAAGACGGCAAGTTTGTTATAAAAGCGTCTCTGTGCTGCGAAGACAGGTCGGACCTGTTGCCAGAACTCATCAAGACCCTCAAATCTCTGAGACTCAGAACCCTCAAAGCCGATATCACCACTCTGGGAGGCCGCGTCAAGAACGTCCTCTTCATCACCGCTGAGAATGAGAATGACAATGAGGATTACTACTCAAGCAGTAATAGTGAGGAAGATAATATTAATAACAACAATAATAATAGTGATCATTACCAACAGCAGCAACAGTATTGTATTAGCTCAATACAAGAAGCACTCAGGGCAGTCATGGAGAAGAGTGTTGGGAATAGTAATGAATCTGCTTCTTCAAGTGTCAAGAGGCAAAGGACTAATATGATATCAATTTCCTAG 1134 0.4427 MKEEDQYSINNNNNNFHHTYHHQEQQQQQQQQLLLQQQIMIQQQQSMMFPNSSIPSDQAISSASPWPNNIPQYPAFNNHHPHFLQPPSNSSSLPYATFFNNNNRRVGVPSMHHQFASSSYEGPSTNDHLRIISETLQHHHHHHHQGVVGPFGLQAEIGKMTAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRTLLPSTTKTDKASLLAEVIQHVKELKRQTSVIAETSPVPTESDELTVDDASDEDGKFVIKASLCCEDRSDLLPELIKTLKSLRLRTLKADITTLGGRVKNVLFITAENENDNEDYYSSSNSEEDNINNNNNNSDHYQQQQQYCISSIQEALRAVMEKSVGNSNESASSSVKRQRTNMISIS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1934 377 PANTHER TRANSCRIPTION FACTOR BHLH30 71 376 IPR045847 GO:0003700|GO:0006355
Aev09g1934 377 MobiDBLite consensus disorder prediction 307 334 - -
Aev09g1934 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Aev09g1934 377 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 228 IPR036638 GO:0046983
Aev09g1934 377 PANTHER TRANSCRIPTION FACTOR BHLH30 71 376 - -
Aev09g1934 377 MobiDBLite consensus disorder prediction 7 31 - -
Aev09g1934 377 MobiDBLite consensus disorder prediction 1 31 - -
Aev09g1934 377 MobiDBLite consensus disorder prediction 354 377 - -
Aev09g1934 377 Pfam Helix-loop-helix DNA-binding domain 175 221 IPR011598 GO:0046983
Aev09g1934 377 Gene3D - 166 231 IPR036638 GO:0046983
Aev09g1934 377 CDD bHLH_AtAIG1_like 167 244 - -
Aev09g1934 377 SMART finulus 178 227 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1934 Aev-Chr9 22793781 22797353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1934 95 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 58.249 8.00e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g1934 HLH 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1934 - - gmx:100799872 320.087