Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1932 ATGGCCGGACCGTCATGGTTGGTAGACAAGAGTAGAATTGCAACCAAAATTAAGTGTGCATCTGGAGCATGTGGAACAGTTATATGGAATAGCAATCCTACCAGAGCTTGTCCCAACTGTCAACATGTTATTGACAACAGTGATGTAGCACAAGAGTGGCCTGGATTGCCGAAAGGTGTGAAATTTGATCCATCTGATCAAGAGTTAATATGGCACTTGCTTGCAAAAGTTGGTATCGGAACTTCAAAACCTCACCCTTTCATTGATGAATTTATTACTACTCTTGAAGAGGACGATGGGATTTGTTATACTCATCCTCAATATTTACCAGGTGTCAAGCAAGATGGCAGTGCTTCCCACTTTTTCCACAGAGCAGTCAAGGCTTATAATAGTGGCAACCGGAAGCGTCGAAAAATTAATGACCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCTGTCATGTTGAATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGCGCGGTCAGAGGAGGAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTAGGAACAGGAGAAGATGAAAAGGATGGAGAGTATGTTATCTCTAAAGTGTTTTTCCAGCAGCAGCAAGTCAAATTGGGTGAAACTGATGACCTTGATATTCCTGAAACCGATGAAGCAACTGATGTGAAAGCAGATCCAGTCACTCCAAAATCTGTGACTCCTGAACCTCCTCGAAATGAAAAGCGATGCCCTGATCACCTGGGACAAGAATTAGATCACATTCCGCAGCATCCCCAAACAGATTGTGTAGAAGACATTCAAGCTGACTGTGAAGAGATTACTAAAACTGAACTATCCATGGTTGAAACTGAAAATAATGAAGGGATGGATAACATAGAAAATAATGCTGATGAAGGCCAAAAATGGTGGGATAGTGAGTCGCAGAATTTGTTGGATTCGCAACAGCTCATAGAAGCATTGGCCTTGTGTGATGATCTGCTACACAGCCAGTCTCCCAATAGGGATGGCAAAAGCGGAGAACACGAGGAACGGCCTGGTCTTTCTGTTTATGCTCGACTAGGACCAGAGCATCTGAAGAAAGATATTGAAGAGTGCCAAAACCTTGCCCTTGATGATGATGCAAATGTGGGCCTTGAGACACCACCATCAGAGTTTCGACTTAGTCAGCTGGAATTCGGCTCACAGGATAGCTATACTGCTTTTGGTGGCTGCAAGCCATTCAACTAA 1272 0.4332 MAGPSWLVDKSRIATKIKCASGACGTVIWNSNPTRACPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQELIWHLLAKVGIGTSKPHPFIDEFITTLEEDDGICYTHPQYLPGVKQDGSASHFFHRAVKAYNSGNRKRRKINDQDFGDVRWHKTGRTKPVMLNGVQKGCKKIMVLYMSAVRGGKAEKTNWVMHQYHLGTGEDEKDGEYVISKVFFQQQQVKLGETDDLDIPETDEATDVKADPVTPKSVTPEPPRNEKRCPDHLGQELDHIPQHPQTDCVEDIQADCEEITKTELSMVETENNEGMDNIENNADEGQKWWDSESQNLLDSQQLIEALALCDDLLHSQSPNRDGKSGEHEERPGLSVYARLGPEHLKKDIEECQNLALDDDANVGLETPPSEFRLSQLEFGSQDSYTAFGGCKPFN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1932 423 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
Aev09g1932 423 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 417 IPR044799 GO:0003700
Aev09g1932 423 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 417 - -
Aev09g1932 423 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
Aev09g1932 423 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Aev09g1932 423 MobiDBLite consensus disorder prediction 222 270 - -
Aev09g1932 423 Gene3D NAC domain 65 219 IPR036093 GO:0003677|GO:0006355
Aev09g1932 423 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1932 Aev-Chr9 22771215 22774949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1932 19 224 NAC Transcription Factor Family AT1G28470 51.887 3.37e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev09g1932 NAM 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1932 - - gmx:100787702 697.197