Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1930 ATGGAGGCACTTACAGTTAGTTCCACAGACGAAACCGCCACAAGCAGCGAATCGCTTTCCGTTACCCTATCGCCGCCGAAGCTGACCTCTAAGCCGCCGCCTCCCCCTCCGACCAACACTCTCGTCCGCCATGGAAGCGGAGCCAGCTCCGTCATCGATCCAGACGGAATCGGCGGCGAGGCTGAGTCCCGGAAGCTCCCGTCATCAAAATACAAAGGCGTTGTGCCGCAACCGAACGGTCGCTGGGGAGCACAGATTTACGAGAAGCACCAGCGCGTGTGGCTCGGAACCTTCAACGAAGAGGACGAGGCAGCCAGGGCCTATGACATCGCCGCCGTGAGGTTCCGCGGCAAGGACGCCGTCACCAACTTCAAGCCACTCGCCGGCGACGACTCCGACGACAGCGAGGCTGAGTTCCTCAACTTGCATTCCAAGGCGGAGATCGTCGACATGCTGAGGAAGCACACCTACGACGACGAGCTCCGGCAGAGCAAGCGCGGCGGCGCGTGCGGTGGAAAGAAACACCGTCGCAACGGCGCAGACGCTGCGGACTCCGCTACGTTCGGCGCGTGCGACGCGCGGGCGCGTGAGCAGCTGTTCGAGAAAACGGTTACACCTAGCGACGTAGGGAAACTGAATCGGTTAGTTATACCGAAACAGCACGCGGAGAAGCACTTTCCGTTACAGGGAAATGGTTGCGCAGCTGCGGCGAAGGGAGTGCTGTTGAATTTTGAGGACGTCGGAGGGAAAGTGTGGCGTTTCCGTTACTCTTACTGGAACAGCAGCCAGAGCTACGTGCTCACCAAAGGCTGGAGCCGGTTCGTCAAGGAGAAGACCCTCCGAGCCGGTGATTTGGTCCGGTTCTACCGCTCGACCGGACCGGACGGTCAGCTCTACATTGATTGCAAGGCCAGGGTGGGTGTTAGTGGTGTTGTTAACGGCGTTAGTGAAGTTGATATTAGGAAGGCTAATAATAATAAGAGCGATAATGGTGATGGTGGGTTGTTTATTCCGGGTGGACCGGTGGTTGAGCCGGTTCAGATGGTTCGGCTTTTCGGAGTCAACCTCTTGAAACTACCCGGTTCGGATGGTGTTGGTGTTGGATGCAATGGGAAGAGGAAAGAGATGGAACTGTTTACGTTAGAATGTAGCAAGAAGCCAAAGATTATTGGAGCTTTGTAA 1182 0.5685 MEALTVSSTDETATSSESLSVTLSPPKLTSKPPPPPPTNTLVRHGSGASSVIDPDGIGGEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAVRFRGKDAVTNFKPLAGDDSDDSEAEFLNLHSKAEIVDMLRKHTYDDELRQSKRGGACGGKKHRRNGADAADSATFGACDARAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQGNGCAAAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDLVRFYRSTGPDGQLYIDCKARVGVSGVVNGVSEVDIRKANNNKSDNGDGGLFIPGGPVVEPVQMVRLFGVNLLKLPGSDGVGVGCNGKRKEMELFTLECSKKPKIIGAL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1930 393 CDD AP2 69 124 IPR001471 GO:0003700|GO:0006355
Aev09g1930 393 ProSiteProfiles B3 DNA-binding domain profile. 200 306 IPR003340 GO:0003677
Aev09g1930 393 Pfam B3 DNA binding domain 200 300 IPR003340 GO:0003677
Aev09g1930 393 SMART rav1_2 70 131 IPR001471 GO:0003700|GO:0006355
Aev09g1930 393 Gene3D - 189 310 IPR015300 -
Aev09g1930 393 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 7 393 IPR044800 GO:0003700
Aev09g1930 393 Gene3D AP2/ERF domain 69 126 IPR036955 GO:0003700|GO:0006355
Aev09g1930 393 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 7 393 - -
Aev09g1930 393 MobiDBLite consensus disorder prediction 1 26 - -
Aev09g1930 393 CDD B3_DNA 199 300 IPR003340 GO:0003677
Aev09g1930 393 ProSiteProfiles AP2/ERF domain profile. 70 125 IPR001471 GO:0003700|GO:0006355
Aev09g1930 393 SUPERFAMILY DNA-binding pseudobarrel domain 199 302 IPR015300 -
Aev09g1930 393 SUPERFAMILY DNA-binding domain 69 125 IPR016177 GO:0003677
Aev09g1930 393 MobiDBLite consensus disorder prediction 1 76 - -
Aev09g1930 393 Pfam AP2 domain 69 117 IPR001471 GO:0003700|GO:0006355
Aev09g1930 393 SMART B3_2 200 305 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1930 Aev-Chr9 22728671 22729852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1930 4 393 B3 DNA Binding Superfamily AT1G25560 56.897 3.42e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Aev09g1930 B3 5.3e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1930 K09287 - gmx:100789009 515.768