Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1928 ATGGATTTCACTGAGAAAATGCAGCGACTCAAGATGGGGTTCCGTGACTACATCCAAGCATTGGAAGATGAACAACGAAAGATTCAGGTCTTCTCCAAAGAGCTTCCTCTTTCATTGGAACTCGTTACGCAAGCCATTGATGCTTGTAGGCAACAGTTGTCTGGTACAACAACAGAGTACAATTTGAACGGACATTCGGAGTGTTCTGACCAGACAACATCGACGGATGGCCCTGTTTTGGAGGAGTTCATCCCAATTAAGAAGAGGGCTTCCCCTGATTGTGATGAAGATGATGAAGATGAGCAACATTCTCATCAATCCAAGATCTCAAAGGATAGCAACCACTCTGATAAGAAGAAATCTGATTGGCTTAGATCCGTTCAGTTGTGGAATCCAGAACCTTCATCAGCTGAAGAGGATGTGAATAAGAAACTGTCTGTGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTCCACAAAGAGGAAAGAGCTACCAAGACAAGTGAGTCATTGAGGAAAGTACCCTCTTTGTCGAATACGCCGGTAGCCACCACGAGTTCCACGGCTGCAGCGGCGGAAGCCAGAGACAATGCTGGAAGCAGCAAGAAGGAGGATAAAGAGGGGCAGAGGAAGCAGCGCAGGTGCTGGTCTCAGGAATTGCACAAGCGCTTCTTGCAGGCCCTTCAGCAGCTTGGAGGTCCAGATTCTGCCACACCTAAGCAAATCAGAGAGCTAATGAAGGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATTCCGGTTGCACACTAGAAGACCAACAACTACTATGGTTCACAACAATGCCAATCCACAAACAGCACCATTTGTTCTAGTAGGCAACATTTTTGTTCAACCATCAGAATATGCAGCAGCTATGGCCACCTCAACAGCAGATCTGGCCACAGTTGCAGCACCGCCGGCCGGCATATACGCACCCTTGGCCACACTTCCTCCGTCTGCTTCAATAAGGAAACCACAGTTCAAGAAAGCACCAGATCATCATGAGTCTGAACATTCACACTCAGAAGAAAGGACTGATAATCACAGTGAAGGTGCAGTTCATTCAAATTCACCAGCTTCATCATCATCCACACATACCACCACAACTTCCCCTGGCTATTGTTGA 1170 0.4684 MDFTEKMQRLKMGFRDYIQALEDEQRKIQVFSKELPLSLELVTQAIDACRQQLSGTTTEYNLNGHSECSDQTTSTDGPVLEEFIPIKKRASPDCDEDDEDEQHSHQSKISKDSNHSDKKKSDWLRSVQLWNPEPSSAEEDVNKKLSVVEVKRSGSGGAFQPFHKEERATKTSESLRKVPSLSNTPVATTSSTAAAAEARDNAGSSKKEDKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPTTTMVHNNANPQTAPFVLVGNIFVQPSEYAAAMATSTADLATVAAPPAGIYAPLATLPPSASIRKPQFKKAPDHHESEHSHSEERTDNHSEGAVHSNSPASSSSTHTTTTSPGYC* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1928 389 MobiDBLite consensus disorder prediction 101 120 - -
Aev09g1928 389 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 384 IPR044787 GO:0003700|GO:0006355
Aev09g1928 389 MobiDBLite consensus disorder prediction 338 389 - -
Aev09g1928 389 Gene3D - 214 272 - -
Aev09g1928 389 MobiDBLite consensus disorder prediction 154 218 - -
Aev09g1928 389 MobiDBLite consensus disorder prediction 90 120 - -
Aev09g1928 389 Pfam Myb-like DNA-binding domain 217 266 IPR001005 -
Aev09g1928 389 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 270 IPR006447 GO:0003677
Aev09g1928 389 MobiDBLite consensus disorder prediction 201 218 - -
Aev09g1928 389 MobiDBLite consensus disorder prediction 366 389 - -
Aev09g1928 389 SUPERFAMILY Homeodomain-like 213 273 IPR009057 -
Aev09g1928 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 272 IPR017930 -
Aev09g1928 389 MobiDBLite consensus disorder prediction 174 198 - -
Aev09g1928 389 MobiDBLite consensus disorder prediction 341 365 - -
Aev09g1928 389 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1928 Aev-Chr9 22711293 22713321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1928 1 330 G2-like Transcription Factor Family AT1G68670 49.560 7.02e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev09g1928 Myb_DNA-binding 4.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1928 - - aprc:113872943 508.449