Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1924 ATGGGAGTTCTGTCTATGCCTATCACTTTCAGCAAATGTCCAACCTTTTCCTTTCTGAACCCAAAAACAACCCAAATTCATAATCTTTCAGCAACCATAAGATTACCCAACAGAAACAATCATTACAATCCTTCTTTTTCTTCTTCCATTTCATGTAATGATTGTTCCTTTAATAGGATAGTAGCAGCAGCAGCAGCAGCAACAACATACCCTTCATTCACTACTTCCTCAACACAGAACCGCCACTGGATGGTGCTCATGGAGAAGCCTCCTCATGGGGTCACTTCCAAGACACAAGTCATTGATTACTATGTCAGCACTCTGCAGAAAGTTCTGGGAAGTGAAAAAGATGCTCAAATGGTTCTATATGATGCTTCCTGGGATACACACTTTGGTTTTTGCTGTGACATTGATGAAGAATTATCCTCCCAGCTAGACAGTTTACCTGGGGTCTTATCGGTTAGGCCTGATCCGGATTTCGATTCTTTGAAGAAGGACTATAGTTTATCAAGTAGCCAGGGAGATCACCTATCAAATTCAGAACCACAATTTGGAACAAATATGCTGTTTCCAACTGGGAATTCGAAGCACTGGCTTGTTAGAATAGATAAACCTGGAGTTTGGGTGGTTACAAAGGCTCAGATTGTAGATTATTATGTTCAAATACTGACAAAGGTCATGGGAAATGAGAAGGATGCTCAGATGTGTATATATCATGTTTCCTGGAAAACCAACTTTGGATTTTGTTGTGAAGTTGACGATGACTGTGCACTGGAGCTAGCTGGTGTGCCTGGTGTCTTATCAGTTCAACCAGATAATAACTTTGAGTCAGAAAATAAGGATTATGAAGGTAGTAACTTGGAAAATAGTTTGAACGTGCAAGACTCTTCTGAATCAAGTCAAGCAGCTCCCCTGAAAACAAAAAAGCTTTTTGTGACAGGGCTATCATTTTATACATCTGAGAAAACCTTACGAGCAGCATTTGAAAGCTTTGGTGAGCTTGTTGAAGTTAAAATTATCATGGATAAAATTTCAAAAAGGTCCAAGGGTTATGCATTTATTGAATACACCACAGAGGAGGCTGCAAGTGCCGCACTGAAAGAGATGAATGGCAAGATTATTAATGGCTGGATGATAGTGGTAGATGTTGCCAAGACTAACCCACGAAGACAGAACATGGGTCGTGGACCATCGGCTTAG 1200 0.405 MGVLSMPITFSKCPTFSFLNPKTTQIHNLSATIRLPNRNNHYNPSFSSSISCNDCSFNRIVAAAAAATTYPSFTTSSTQNRHWMVLMEKPPHGVTSKTQVIDYYVSTLQKVLGSEKDAQMVLYDASWDTHFGFCCDIDEELSSQLDSLPGVLSVRPDPDFDSLKKDYSLSSSQGDHLSNSEPQFGTNMLFPTGNSKHWLVRIDKPGVWVVTKAQIVDYYVQILTKVMGNEKDAQMCIYHVSWKTNFGFCCEVDDDCALELAGVPGVLSVQPDNNFESENKDYEGSNLENSLNVQDSSESSQAAPLKTKKLFVTGLSFYTSEKTLRAAFESFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTNPRRQNMGRGPSA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1924 399 SUPERFAMILY RNA-binding domain, RBD 297 396 IPR035979 GO:0003676
Aev09g1924 399 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 30 395 IPR039206 GO:0016554
Aev09g1924 399 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 190 276 IPR037045 -
Aev09g1924 399 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 65 161 IPR037045 -
Aev09g1924 399 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 310 376 IPR000504 GO:0003723
Aev09g1924 399 PANTHER ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 30 395 - -
Aev09g1924 399 Gene3D - 277 399 IPR012677 -
Aev09g1924 399 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 308 386 IPR000504 GO:0003723
Aev09g1924 399 SMART rrm1_1 309 382 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1924 Aev-Chr9 22678371 22681030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1924 305 390 C2H2 Transcription Factor Family AT2G19380 33.721 3.59e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1924 - - gmx:100791652 586.26