Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1902 ATGATTTCTTCTGGGATCAACTTGGTGATGACCGTGATTGGGTTCGCGGTGAGCACCATGTTCATTGTCTTCGTGTGCACGAGGCTTGTCTGTGCTCGAATTCACTTGAATGCTTCAAGGAGATCCTTTCTTATTGCTTCAAGATCCAATCTCAGCATGATGGAACGGGGTTACCATGGTCTTGATCGCGTAGCTGTAGCCAAATTTCCAACAAAGAAGTACAGTGACAAGTTTTTTTCTTCTGCAGAAATTTCTCAATGCACAGTCTGCCTCTCAGAGTATCAAGGTGAAGATATGTTGCGCATCCTCCCCTATTGTGGACACTCATTCCATGTGACCTGCATAGACTTATGGCTGCAGCAGAATTCCACTTGTCCTGTTTGTCGAATATCATTGCGCCAATTTCCTGAGAGAAAGCGGTTATTGCAACCCTTGTCCAGCTCTGCTCTGCGACCTCATTACAGAACAGAATCCTTAGACGATACCCATTATCAATGTATGATGGCTGATAATGGATTATCATCAAGAACGCCACAGAATCACAACCATGGGGTGAATGCTATACAAGAGGATCATTTTCCATCTGAGGGTGGCGGAACAGCTACTAGGGACAATATCACCTGTCTAAGTCCAGGTGATCTTATTAAAGATGAAGAGAAGAAGCATGTAGAAAGCCCATCAAATTTCTAG 690 0.4406 MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNASRRSFLIASRSNLSMMERGYHGLDRVAVAKFPTKKYSDKFFSSAEISQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLRQFPERKRLLQPLSSSALRPHYRTESLDDTHYQCMMADNGLSSRTPQNHNHGVNAIQEDHFPSEGGGTATRDNITCLSPGDLIKDEEKKHVESPSNF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1902 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 134 IPR013083 -
Aev09g1902 229 PANTHER OS11G0150450 PROTEIN 1 228 - -
Aev09g1902 229 MobiDBLite consensus disorder prediction 213 229 - -
Aev09g1902 229 PANTHER OS11G0150450 PROTEIN 1 228 - -
Aev09g1902 229 CDD RING-H2_PA-TM-RING 86 129 - -
Aev09g1902 229 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Aev09g1902 229 Pfam Ring finger domain 86 129 IPR001841 -
Aev09g1902 229 SMART ring_2 87 128 IPR001841 -
Aev09g1902 229 SUPERFAMILY RING/U-box 70 135 - -
Aev09g1902 229 MobiDBLite consensus disorder prediction 193 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1902 Aev-Chr9 22517688 22519609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1902 13 136 C3H Transcription Factor Family AT4G10150 35.156 4.90e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1902 - - gmx:100786109 399.823