Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1900 ATGGGAGACCCATATGGCCTCCAGGAGGATCTCCGGCGGCTAATATCCTCACGAACCACCACAGTCCTCCCACCACCGCCAGACCCACTCTCTCTCCACCACCACCACACTCTGACTCCTCCCAATAACTACGACCCCATCAACTTGGTTGGTGGTGGGGACGCAGTTTTCTTCCCTCCATCTGCTCGTGCCTCTGCTAATAATAATAATAACCCCTTATTCCCTCATCATCACTACTACACCAATTCTTCTTCCTCAAATTCTCTCAACCCCACAATCACTAATACTAATAATAGTAATAGTAATAGTAATTGTGTCGCTGCAGCAACTACAACTGGCGCCTCAGATCATCATGCACCATTCTGCAGCAGCATAGACAGTAAAGGGTGGCTCGGGTTCGACTCCGGAAGCAACAGGTGGCCACGGCAGGAGACTCTCTCGCTTCTCGAGATCAGATCTCGTCTCGATTCCAAGTTCAGAGAGAACAATCAGAAAGCTCCCTTGTGGAACGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGGAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGTAAAGCCAGTAGACAAGATGGGAAGCACTACAGATTCTTCAGGCAGCTTGAAGCTATTTGTGGTGCTGCTGCTGTTCCTGGTGGTGAGCCTTCTATTACTGCTCCTCCTCCTCATCATCATGCTGCTACAAACAGTGTTCATCAGGCTCCATCAACAAGCTTCAAAATGAATCACCAGCACCAACAAGATCACATCATCAATTTTGCTGATCATCACCTCAAGAAGATCATTGAGACTCAAGATGCATGGATGGAGAGAATGCTGAGTGTGGTTGAACAAAGGGAGCAAGAGATGGCATCCAAGGAGGAAGAAAGGAAGAGGAAGGAGTCAATGAGGTTTGACCAAGAAGTCCATCAGCTCTGGGCTAAGGAAAGAGCTTGGGTTGAAGCTAGAGATGCTGCATTGATAGAGCTTGTCAGGAAACACATTGGTAATAATACTAATACTAATAATAATAATAAAAGCATTGAAGCAATGGTAATTGGTAGCAAGAACAAGGGTGATGAGTATCATAACAGTGGTGGTGGTGGATGGAGTGAGATGGAGATTTCAAACTTGATACAGTTGAGGACTGGTTTTGAACAGCGGTTGATGAGGGAGAATAATAATAATAATAATAGTAATAGTAATAGTAATGGTAATGGGTACTTGTTGTTGGAGAATGGGGCTTGGGAAGAGATAGCAGGGAAATTGGGGTGTATGGGGTATGAGAGGAGTGCTGGTGAGTGCAAGCAGATATGGGATGAGATCAGCATCTCGCTGGGGAGGACAGTTGTGGTCGATGACTGTGCTGCCAAAACTAGGCCTTGGTGTTTGGGACTTAAGCTGACCCATGATGATGACCAACTTTAG 1470 0.4551 MGDPYGLQEDLRRLISSRTTTVLPPPPDPLSLHHHHTLTPPNNYDPINLVGGGDAVFFPPSARASANNNNNPLFPHHHYYTNSSSSNSLNPTITNTNNSNSNSNCVAAATTTGASDHHAPFCSSIDSKGWLGFDSGSNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGAAAVPGGEPSITAPPPHHHAATNSVHQAPSTSFKMNHQHQQDHIINFADHHLKKIIETQDAWMERMLSVVEQREQEMASKEEERKRKESMRFDQEVHQLWAKERAWVEARDAALIELVRKHIGNNTNTNNNNKSIEAMVIGSKNKGDEYHNSGGGGWSEMEISNLIQLRTGFEQRLMRENNNNNNSNSNSNGNGYLLLENGAWEEIAGKLGCMGYERSAGECKQIWDEISISLGRTVVVDDCAAKTRPWCLGLKLTHDDDQL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1900 489 Coils Coil 290 317 - -
Aev09g1900 489 CDD GT1 138 204 - -
Aev09g1900 489 SMART sant 136 199 IPR001005 -
Aev09g1900 489 SMART sant 380 459 IPR001005 -
Aev09g1900 489 PANTHER - 76 267 - -
Aev09g1900 489 PANTHER - 270 460 - -
Aev09g1900 489 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 76 267 - -
Aev09g1900 489 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 270 460 - -
Aev09g1900 489 Pfam Myb/SANT-like DNA-binding domain 138 225 IPR044822 -
Aev09g1900 489 ProSiteProfiles Myb-like domain profile. 138 197 IPR001005 -
Aev09g1900 489 Gene3D - 140 202 - -
Aev09g1900 489 Gene3D - 384 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1900 Aev-Chr9 22499093 22501631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1900 139 457 Trihelix Transcription Factor Family AT5G03680 39.740 3.35e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev09g1900 Myb_DNA-bind_4 3.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1900 - - gmx:100784522 428.713