Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1870 ATGAACTGTCTTCAGAATCTTCCTCGATCCTCTGCTTTGCCCTTCCAGACAGTCACGCGCCACCACAAGAATCCTCCTTTCTCTGTTTCACTGGGGATCCTCAATAACTCCCATCAAAATCGAAGTATGGCAATTAAGTCTGCTTCCGGTTCCATACCCAGTGCAGAGACAAGTAGTGGCAGTATGAAGGAGGAAGAGTCTGAAAAGTCTGAGACATACAGTCATAACATGACAGAAGCCATGGGCGCTGTTTTGACATATAGGCATGAATTAGGAATGAACTACAACTTCATCCGTCCAGACTTGATAGTGGGATCATGCCTACAGACTCCTGAAGATGTTGACAAGCTCCGTAAAATCGGAGTGAAAACCATTTTTTGCTTGCAACAAGATCCAGACCTAGAATATTTTGGAGTTGATATCAATGCCATACGAGAATATGCCAAGGCATGCAATGACATTCAACACTTGCGTGCTCGGATAAGGGACTTTGATGCATTTGATTTACGGATGCGTCTACCAGCTGTAGTGAGCAAATTATACAAGGCAATAAATTCCAATGGAGGTGTGACATACATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGCTGGCATATATGTTTTGGGTTCAGGGTTATAAACTTAATGAGGCTCATAGTTTACTCCAGAGCAAAAGATCTTGCTTTCCAAAACTGGATGCCATAAAAAGTGCGACTGCTGACATTCTTTCAGGCCTGAGTAAGAAGTCTGTCACTTTATCATGGGAAGGCAACAATTGCTCTTCAGTGGAAATTTCGGGACTCGACATTGGATGGGGGCAGAGAATCCCTCTAAATTTTGATGACAAGCAGGGTTTGTGGTTTCTCAAAAGGGAATTGCCTGAAGGGCGCTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAACAAGGATGAGCTTGTGACCTCTCCCAATAAGGATGGCCATGTCAATAATTTTCTTGATGTGCTTGATGATCCCAGCAGCGATCGCGCATCGCTTCGGGAGAGATTGACCGGCGATGATCCTGATCTCACAAAGGATGAACGACTGAGAATAAGAGAGTTTCTCGAAGCTTGTCCCGACGACAAGCAGTGA 1131 0.4474 MNCLQNLPRSSALPFQTVTRHHKNPPFSVSLGILNNSHQNRSMAIKSASGSIPSAETSSGSMKEEESEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDINAIREYAKACNDIQHLRARIRDFDAFDLRMRLPAVVSKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAHSLLQSKRSCFPKLDAIKSATADILSGLSKKSVTLSWEGNNCSSVEISGLDIGWGQRIPLNFDDKQGLWFLKRELPEGRYEYKYIVDGEWTCNKDELVTSPNKDGHVNNFLDVLDDPSSDRASLRERLTGDDPDLTKDERLRIREFLEACPDDKQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1870 376 MobiDBLite consensus disorder prediction 44 60 - -
Aev09g1870 376 Pfam Dual specificity phosphatase, catalytic domain 137 232 IPR000340 GO:0008138|GO:0016311
Aev09g1870 376 Gene3D Immunoglobulins 249 339 IPR013783 -
Aev09g1870 376 Pfam Glycogen recognition site of AMP-activated protein kinase 254 336 IPR032640 -
Aev09g1870 376 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 375 IPR030079 GO:0005982|GO:0007623|GO:0019203
Aev09g1870 376 CDD DSP_laforin-like 93 240 IPR045204 GO:0019203|GO:0046838
Aev09g1870 376 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 171 229 IPR000387 GO:0016311|GO:0016791
Aev09g1870 376 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 375 - -
Aev09g1870 376 SUPERFAMILY E set domains 253 335 IPR014756 -
Aev09g1870 376 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 91 236 IPR029021 -
Aev09g1870 376 CDD E_set_AMPKbeta_like_N 253 334 - -
Aev09g1870 376 ProSiteProfiles Dual specificity protein phosphatase domain profile. 94 251 IPR020422 GO:0006470|GO:0008138
Aev09g1870 376 Gene3D Protein tyrosine phosphatase superfamily 87 367 IPR029021 -
Aev09g1870 376 SMART dsp_5 94 244 IPR020422 GO:0006470|GO:0008138
Aev09g1870 376 MobiDBLite consensus disorder prediction 44 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1870 Aev-Chr9 22244187 22249425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1870 93 373 Protein tyrosine phosphatase (PTP) family AT3G52180 71.886 1.22e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1870 - - gmx:100804010 657.136