Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1865 ATGACAGATTTTCAGCCGCTACAGCAGAAGCCTGAGACTGCTGATGCCCATGCTGAGTTTGAACGTGGATTGGAGGACTTTATGCGTGGGCACTTGGATGATTGTATGTCATTTGCTTCATGTAGCTCCTCAAGGGCACAGGATGATGAGGATGATGAGGGTGATCAGCTTGTTAGGAGGAGGCGGAGGTCTGATCTTGAAGGGGATGATTTGGCAGAGTCCTCGGCTGCACGGAGGCGCCACTCACGGATTTTGAGTAGGTGGGCTGCCCGGCAGGCGCAGGAGATGATAACTACTATTGAGAGGAGGAACCGGGAGTCTGAGTTGATGGCACTCGCTGGATTGCACACTGTGTCGATGTTGGACTCCTCTTTTTTGAGGGGATCACAGTCCCCTACTTCTGGACAGGAGGGGGCTCAGGAGAGGCCAAGCACTCAGGCGTCTGCCATTCTACAGATGTGGCGTGAGTTGGAGGATGAGCATCTGTTGAATCGGGCTAGGGGAAGGATGAGGGAAAGGTTGAGGCAGCAAAGGAGTTCCGAGTCTAATACCAATGTGTCAAGTACCATGTCTGATAGTCGGGGCAGTGAGAATCAAGGGAGTTTGGGGGATGCTAGTGAAAGTGAAAATGATTTTGGTACTTGGTCACATGATCAGGTTGGATCGCGGAATGCACATGGCGATCACAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTTAGGGGATGGATGGAAAGTGGTATTAGTGATCGTTCATCTAACGTGAGTCAAAGAAACAATAACCGTAGAGCAGAATGGCTTGGTGAAACAGAGCGTGAGAGGGTAAGAATTGTTAGGGAATGGGTGCAGATGACCAGCCAGCAGAGGGGTTCACGTGGTAGCCGGAGAGATGCTCAAGTAAGTGAAGGTGCTCAAGTTGATCGAGCGCGTGATGTCGTAACTGATCATGATGAGGGCCAGCCAGAGCATGTTCGGAGGGACATGTTGAGGTTGCGTGGAAGACAGGCTCTAGTTGATTTGCTTGTGAGGATAGAAAGGGAAAGACAAAGAGAGCTGCAGGGCTTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCATCGCAACCGCATTCAGTCATTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGATGAAGATGAGAGGCCTCCATCTATGGCTGCTAGTGAATTGGTTCAGTTGAGACAACGACACACAGTCTCCGGTATAAGGGAGGGGTTTCGCTCAAGACTAGAAAATATTGTTCGTGGTCAAGCAGAAACCAATCCTGATGCCACGTCAAATAGTAATATTAGTGAAACGAGAGGTGACGGGAACCTAGCAAACAATCTGTTGGATGCCCAACAAGAAAATTATGAACAAGAGCAGGTTAGGAGCCTGGAAACTGATGTGCGTCAGTTACCTAATCAATCAGTTACTGTGGAGAGTAACACAAGTGAGAGTATTAGTTGGCAAGAAGCTAGTAATCAGGCAGGAAATCAACAGGAACAAATTACTGAAGATGAAGGAGGAAACTGGCAGCAGAGAACCTATGTTCCATTCAATCGGTCGAGAGATGGAAGGGCAGACAGTGATTGGCCGCAGGAAACTCCCAGAAATTTAGCTGGGGAAGACACGCATCCACAAGAAGCGCAAAGAATTTGGAATGAGGATAGCTCGAGGGAAGCTGTTGGTAATTGGTCGGAAGGACCTACTGGAACGACAAGGAATCGTCGTGGTGTTCCTTTTAGAAGATTCAATAGATTTCATCCACCTGATGATGATAACGTGTACAGTATGGAGCTTAGAGAGCTTCTGAGCAGGAGAAGTGTTTCAAATCTTCTTCGCAGTGGTTTTCGTGAAAGTCTTGATCAACTCATTCAGTCCTATGTGGAAAGGCAAGGCCGTGCACCAATTGACTGGGATTTGCATAGGAATTTGCCAACACCAACTCCTGCCTCACCTGAACAAGACCCCGATCAGCAGGGTGATGAACATAATGATGGTCAGCATGAAGCCATCAACAGACCTTCGTTGGTGTTGCCTTCTCCTCCAGTACCTCCACCACAGCCAATGTGGCACCAGGATTTGCATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATGGAATGGGAGATAATGAATGATTTAAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGCTGGAGGCGTGCATGGATATGCAGCTGGAGTTGCAGCGCTCTGTTAGACAGGAAGTTTCTGCAGCTTTGAACCGCTCAGCTGGTGAAAATGGCTTGGGTATTGAGACATCTGATGATGGGTCTAAATGGGGGCATGTGAAAAAGGGAACTTGCTGTGTTTGTTGTGATAACCATATTGATTCACTTTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCCAACGAGTTAGTTCGCAGTGGAGGTAAGTGTCCTTTATGCCGAGCACCGATTGTCGAGGTGGTCCGAGCATACTCCATACTGTAA 2559 0.4818 MTDFQPLQQKPETADAHAEFERGLEDFMRGHLDDCMSFASCSSSRAQDDEDDEGDQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAQERPSTQASAILQMWRELEDEHLLNRARGRMRERLRQQRSSESNTNVSSTMSDSRGSENQGSLGDASESENDFGTWSHDQVGSRNAHGDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDRSSNVSQRNNNRRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDAQVSEGAQVDRARDVVTDHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTDEDERPPSMAASELVQLRQRHTVSGIREGFRSRLENIVRGQAETNPDATSNSNISETRGDGNLANNLLDAQQENYEQEQVRSLETDVRQLPNQSVTVESNTSESISWQEASNQAGNQQEQITEDEGGNWQQRTYVPFNRSRDGRADSDWPQETPRNLAGEDTHPQEAQRIWNEDSSREAVGNWSEGPTGTTRNRRGVPFRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPTPTPASPEQDPDQQGDEHNDGQHEAINRPSLVLPSPPVPPPQPMWHQDLHQTGWSRHSMHRSEMEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLGIETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIVEVVRAYSIL* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1865 852 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 852 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 571 587 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 481 533 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 52 78 - -
Aev09g1865 852 Coils Coil 729 749 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 653 699 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 313 333 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 433 459 - -
Aev09g1865 852 Pfam Zinc finger, C3HC4 type (RING finger) 797 844 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 41 78 - -
Aev09g1865 852 CDD mRING-HC-C3HC5_NEU1 799 839 - -
Aev09g1865 852 SUPERFAMILY RING/U-box 799 845 - -
Aev09g1865 852 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 785 850 IPR013083 -
Aev09g1865 852 MobiDBLite consensus disorder prediction 481 591 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 298 333 - -
Aev09g1865 852 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 852 - -
Aev09g1865 852 ProSiteProfiles Zinc finger RING-type profile. 800 839 IPR001841 -
Aev09g1865 852 MobiDBLite consensus disorder prediction 169 244 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 222 244 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 434 459 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 179 221 - -
Aev09g1865 852 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1865 Aev-Chr9 22183497 22187233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1865 800 846 C3H Transcription Factor Family AT3G06140 42.553 1.03e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1865 - - gmx:100805607 1464.9