Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1857 ATGTCAGGGGTGGAAATTTGGCCATCAATTGATGAGGAATCTGGCAAATCTCTACCTCCATTTGATCAAAAGAGTGGCTATGATTCAAGAACTGGAATCTATCACTCTCTAGTTAAACTTGAAACCAAATATGAAACCCCAACAAGGCCTGATCTAAATGCTGCACATCTTGTATTATCACAGTTCCCACAAGGGGACCTTGCTGAGGTGAAAACAGCATACATTGATGCAGCTACTAATAAGAGCTTAAGCTACGGCGAGCTTCGCCGGTCTATATACTCCCTTGCATCGGCTCTGTATCATGGACTTGAAGTTAGGAAAGGGGATGTTGTGTTTGTCTTGTCACCAAACTCAATCTTGTTCCCAACAATATGCTTAGCTGTGTTATCAGTTGGTGCAGTTCTCACCACTGCAAACCCTCTCAACACTGAGTCAGAAATTGCAAAGCAAGTAAAGAACTCGGGTGCAAAATTAGCCATTTCGGCGCCTGAGGAGATTCACAAATTGGTTCCAACTGGGGTGCCTACAATGCTTACATGTCGTCCGCCCGACGGCCAGATGTTATCGGTTGAAGAGTTGATAGAATGCTGCTCTGGCTCTCTAGAGCTGCCACCGGTTCCGGTAGCTCAATCAGACACTGCTGCTATTCTCTACTCTTCAGGGACTACAGGGGTAAGCAAAGGTGTGATTTTGACACACCAGAACCTCATTTCCACAATGACACTACTCTTCTGGTCTGCTCATGCAACTGCATCTCAAGATGATGTCTTCTTAGCCTTCATTCCAATGTTTCACATCTATGGACTGATCTTCTTCGGGTTAGGATTGTTGTGTGTTGGTGTCACAACAATCATGATGCAGAAATTCGACTTCCAAGCTATGCTTGCTGCAATCCAGAAGTACAGAGTTAATAACTTACCGGCAGTGCCACCAGTGATCCTTGCACTGGTGAAGTATGCGAGAAACGTTGGGTGTGACTTGTCCAGCCTTAGAAGGGTTGGATCAGGTGCTGCACCATTGAGTAAGGAAGTGGCACATGAGTTCAGGAACATGTTTCCTTGGGTTGAACTGAGGCAAGGTTATGGCCTAACAGAAAGTGGGGCTGCAGCGACATTTTTCGTGTTGGATAAAGATGCTAAGACTCATCTAGACTCATGTGGGAAGCTACTTCCAACCTTCTGTGCAAAAGTGGTGGACATAGAAACTGGAAAGGCATTGCCTCCTAACAAGGAAGGAGAATTGTGGCTGAAGAGCTCAACTATTATGAAAGGATATCTGGGAAATTTGGAGGCAACAGCTGCAACAGTTGATTCAGAAGGGTGGTTGAAAACAGGTGATCTTGCTTATATTGATGATAATGGATTTGTTTATGTGGTTGAAAGAATAAAGGAGCTGATCAAGCACAATGGATACCAGGTGGCTCCTGCAGAACTGGAATCTCTGTTACTGAGTCATCCCCTCATTGTTGATGCAGCAGTTATACCAGTTGAAGATGAAGAAACTGGACAGATACCAATGGCCTATGTTGTGAGAGCAGCTGGTTCTGAACAACTCTCAGAAGATCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCACCATATAAGAAAGTGAGAAGGGTTAGTTTCATTAACACCATTCCAAGATCAGTTGCTGGCAAGATATTGCGCAAGGATCTTGTTTCTCAAAGCAAACAACAACAACAACTTGTATCCAAGTTATGA 1722 0.4431 MSGVEIWPSIDEESGKSLPPFDQKSGYDSRTGIYHSLVKLETKYETPTRPDLNAAHLVLSQFPQGDLAEVKTAYIDAATNKSLSYGELRRSIYSLASALYHGLEVRKGDVVFVLSPNSILFPTICLAVLSVGAVLTTANPLNTESEIAKQVKNSGAKLAISAPEEIHKLVPTGVPTMLTCRPPDGQMLSVEELIECCSGSLELPPVPVAQSDTAAILYSSGTTGVSKGVILTHQNLISTMTLLFWSAHATASQDDVFLAFIPMFHIYGLIFFGLGLLCVGVTTIMMQKFDFQAMLAAIQKYRVNNLPAVPPVILALVKYARNVGCDLSSLRRVGSGAAPLSKEVAHEFRNMFPWVELRQGYGLTESGAAATFFVLDKDAKTHLDSCGKLLPTFCAKVVDIETGKALPPNKEGELWLKSSTIMKGYLGNLEATAATVDSEGWLKTGDLAYIDDNGFVYVVERIKELIKHNGYQVAPAELESLLLSHPLIVDAAVIPVEDEETGQIPMAYVVRAAGSEQLSEDQVIQFVAGQVAPYKKVRRVSFINTIPRSVAGKILRKDLVSQSKQQQQLVSKL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1857 573 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 564 - -
Aev09g1857 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 564 - -
Aev09g1857 573 Gene3D - 44 463 IPR042099 -
Aev09g1857 573 Pfam AMP-binding enzyme 71 467 IPR000873 -
Aev09g1857 573 Pfam AMP-binding enzyme C-terminal domain 477 553 IPR025110 -
Aev09g1857 573 Gene3D - 464 569 IPR045851 -
Aev09g1857 573 CDD 4CL 47 559 - -
Aev09g1857 573 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Aev09g1857 573 SUPERFAMILY Acetyl-CoA synthetase-like 71 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1857 Aev-Chr9 22134541 22136772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1857 71 560 Monolignol Biosynthesis Gene Families AT1G20500 46.586 2.00e-152 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1857 K10526 - gmx:100796728 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1857 09 22134541 22136772 Aev09g1857 09 22134541 22136772 ECH