Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1846 ATGTTTTCTAGGTTGATTCATCCTTCTCCCCATGAAGGCGGTGAAGACATGCAGGGTGGTTCCAATCACGGTCACCTCGGAGACCCATGTCTGGTTCTCACATCTGATCCAAAGCCTCGCCTCCGTTGGACCGCTGACCTCCATGAACGATTTGTTGATGCTGTCACTCAACTTGGGGGCGCCAGCAAAGCTACACCAAAAGCGATCATGAGGACCATGAATGTCAAGGGTTTGACTCTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCAGGAAAAGATTCTGATGAGGGATGCAAAGATGGAATATCAGCTTCATATCCTCTTGAAAGCCCTGTCAGTGGCACAGATAACTCATCTCCTAAATTACCAGCTTCCGACGTAAACGAGGGTCATGAAGTCAAGGAGGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTACTAGTGGAGGCAGAGAAGCACTTGCAGATTGGCCAGGATGCCGAGCGGAAGTACATGGCCATGCTTGAGAGAGCTTGCAAGATGTTGGCGGACCAATTCATCAGCGATCCAATGGTAGACGCAGACAACCTAGGACTCGGGAACAAAGAATCATCAAGAGTTGATCCCCTCAGCTTCGGCTCCATACCAACCGAAGCAGGTGGAATGCACGTTTCAGAAGTGCCACCACCATTCATTATGCAGGCACACGGGGCTGACGGTGACACCCAATGTTGCCTAACATCGCTCGAGAATCTTGGAGGGTTGATGACACTAGAAGGGTCACCCGGCGGGGCAAAGAAGAGGGTGCTGAATTTGGACTCAGTGGTGGCACCCTTGATATGGAATGAAGCTAACATGAGAACTCAAGGGATCCATTTAGGGCAAGTGAATCCTCATCATGGAATAACTAGGTATGGCATGTAG 930 0.4882 MFSRLIHPSPHEGGEDMQGGSNHGHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGISASYPLESPVSGTDNSSPKLPASDVNEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIGQDAERKYMAMLERACKMLADQFISDPMVDADNLGLGNKESSRVDPLSFGSIPTEAGGMHVSEVPPPFIMQAHGADGDTQCCLTSLENLGGLMTLEGSPGGAKKRVLNLDSVVAPLIWNEANMRTQGIHLGQVNPHHGITRYGM* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1846 309 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Aev09g1846 309 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Aev09g1846 309 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 309 IPR044848 GO:0003700
Aev09g1846 309 MobiDBLite consensus disorder prediction 93 132 - -
Aev09g1846 309 MobiDBLite consensus disorder prediction 1 31 - -
Aev09g1846 309 MobiDBLite consensus disorder prediction 114 130 - -
Aev09g1846 309 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Aev09g1846 309 Gene3D - 37 95 - -
Aev09g1846 309 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 309 - -
Aev09g1846 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Aev09g1846 309 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1846 Aev-Chr9 22050124 22052662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1846 1 187 G2-like Transcription Factor Family AT3G24120 56.061 6.69e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev09g1846 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1846 - - gmx:100779871 471.085