Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1835 ATGAACAGCAACAACACTTCATCAAAATCAAATCTTGATGACCCTTCTTCAGAGAATTTGAATGGATATGCATACTACTCTGTTGGATTATGCCTTGGATTTCTCCTCTTAATGACATTCATAGCTCTCACTGCATATTACTGCACCCAAAGAGGAGCCTTGCACAGCAGACCAAGTAGCAGCAGAACAAGTTCTTCTAACAGGACAGTGATCTCTATAGACACTAGAGATTCTTCTGCTATGACTATACAAGAACAAGAAGAAGCAATATTGAACACTTATCCTGTTCTGTTATTCTCACAAGCTAAGCTTCATAAACCTGATTCAACATCACTTAGTTGCTCAATATGTTTAGCAGATTACAAGGATTCTGAGTGGTTGAGGCTGTTACCAGATTGTGGCCACTTTTTTCATAGGGATTGCATTGACATTTGGTTGAGGTTAAACCTTTCATGTCCAATGTGTAGAAACTCTCCATTCACTACTCCTCTTGCTCAACTTGCTCCTTTGGCTACAACAAGAGATTGA 528 0.392 MNSNNTSSKSNLDDPSSENLNGYAYYSVGLCLGFLLLMTFIALTAYYCTQRGALHSRPSSSRTSSSNRTVISIDTRDSSAMTIQEQEEAILNTYPVLLFSQAKLHKPDSTSLSCSICLADYKDSEWLRLLPDCGHFFHRDCIDIWLRLNLSCPMCRNSPFTTPLAQLAPLATTRD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1835 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 160 IPR013083 -
Aev09g1835 175 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 5 166 - -
Aev09g1835 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 166 IPR045899 -
Aev09g1835 175 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Aev09g1835 175 CDD RING-H2_PA-TM-RING 114 156 - -
Aev09g1835 175 SMART ring_2 114 155 IPR001841 -
Aev09g1835 175 SUPERFAMILY RING/U-box 94 160 - -
Aev09g1835 175 Pfam Ring finger domain 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1835 Aev-Chr9 21972448 21972975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1835 16 171 C3H Transcription Factor Family AT5G06490 33.523 5.25e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1835 - - adu:107466513 208.379