Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1834 ATGTCATCCAACAACAATGGCTTTGATGCTAGTGGATTCACATATGGCATAGCTTTTATAGTTGGCTTGATCTTCTTGCTTGTAACAATAGCTTTTGCATGTGTGAGACTTAGGTTAACAGAAACCCCCAACAACATTCACAACATCATGGCTACTTTCCCATCATCACAACAAGTTGAGCACTTCATCAATCAACCCTTGGAACAACAACATCATCATGTTCACATTAACACAAGTACTTTCCAAAGTTACCCTAAATTGCTTTACTCTCAAGAACTTCTTGAGAACAAAGATAATGGGTCAAGGGTTTCCTCTATTTGCTCCATATGCTTAGGGGATTACAAGGAAAGTGACATGTTAAGGATGCTTCCTCATTGTGGCCATGTGTTCCACCAAGCTTGTGTTGATCCATGGCTCATATTGCATTCCACATGCCCCATATGTAGAAAATCTTCAATTCAAGGTTCTTCCAAGCCATCTATTAGTGCCTCCAATTTTGAGGAGTGA 507 0.3984 MSSNNNGFDASGFTYGIAFIVGLIFLLVTIAFACVRLRLTETPNNIHNIMATFPSSQQVEHFINQPLEQQHHHVHINTSTFQSYPKLLYSQELLENKDNGSRVSSICSICLGDYKESDMLRMLPHCGHVFHQACVDPWLILHSTCPICRKSSIQGSSKPSISASNFEE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1834 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 153 IPR013083 -
Aev09g1834 168 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Aev09g1834 168 Pfam Ring finger domain 107 149 IPR001841 -
Aev09g1834 168 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 158 IPR045899 -
Aev09g1834 168 SUPERFAMILY RING/U-box 80 153 - -
Aev09g1834 168 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 9 158 - -
Aev09g1834 168 SMART ring_2 107 148 IPR001841 -
Aev09g1834 168 CDD RING-H2_PA-TM-RING 107 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1834 Aev-Chr9 21969378 21969884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1834 12 153 C3H Transcription Factor Family AT5G06490 34.416 8.01e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1834 - - gmx:102663718 176.407