Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1819 ATGGCAGGGAACTTCAGATTCACAATGGACCAGAAGGATATTGTTAGATTCTTGACAGCAACCATTGATAGTTTCATTCAAGATAGGTTAATCAACAAAGAACAAAGAGCACAGCACAAAGAACAGTGTGCAGAGAGGTTAGCAGCAGAGGATGGAAGTTGCGAAAAAGAAACCGAGGTCGAGTACTCTGATCAAGCAGTACTAGCAAATCTTGATTGGGGAATTGAAGCACTTGAAGAAGCTATAAACACCTATAACATGGAAACTAAGCTGGCAAGACTAGATTATGCAGAGAAGATGTTGCAAGTTTGTGCAATGTTGAATCCTAAGCTAAAAACCGCAGGTGTGCCGAATTTCTACCTCTCAGCTTGGGCACACTTGAACCTATCTTACTTATGGAAGTTGAGGAACAATGTTCAAAATTGTGTTTTTCATGCTCTTGAGATGTTCATTGTTGATCCCTTCTTCGCTCGGGTTGATTTTGCGCCGGAGCTATGGAAAATTCTGTTTCTTCCACACATGAGTTCAATTGTAGGGTGGTATTCAGAGGAGAGGCATAGGCTTATGATGGAAGTGATACCAGAAAATTCTGATATGTCCTTTACTGCAGATTTTGATCAACTCTTCAATGAGTCATTGGTGTTTTCTATGAAGCCTAATCAGTTAGATAAGTTGCAAAAGCTGGAACAGCTTTATGGAGAGTCATTGGACGAGAACACGCGGCTATATGCAAAGTACTATAAGGATTGCTTGAACTCTGATTCCACAAATGGCAAGAAGGTGGCTCCTATGTTGCCAATTGCTGAGCCTCCAATGACTCCTTTGCACGAGTTGAGCCGATCCGTTCCGGATTATGTGAAATTTGGTCCTATTTTGCCGAAGAGTGCTGGTTTTTCTTTGATGTTAAGACTTAAAGATGGTGAAAATGAGAAATCCAGTGAGGAACCTTCTATCCATTCTAAGGAAGAGAATTCATCTATATGGGGAGCAAAGGAAAGCATCATTGAAGAGAATGAAGGTGATTCAGATTTTGAGCTTGATGATGCATCTGTGGATTCTAATAACAAGAATAATAACATTTTCTCACCTAAAATGAAGGCCATGAAGGATGATGATGATATCGAACCGAAAGTGCACCTCTCAAACCAGAAGAACCAAATATATTCTCCTACTATCTCCTCTCCCTTGGACTCCCCAAGAATTTCTCATAATTCATCTGCAAATCCTGATTCGCGAAGCAGAAGAGAACCAAAGTATTTGCGCTTATTATCTAGTCGTTTAAGGGACTCGACAATTTCCGACTCATTATCATCATCTCCAGACATGAGTGCTGATCACATTTACAGCTCTGATAATGAAACAATGGTCTTGAAGAACATTAGAAGGAAAAACTCCAACCAACTGCTAAGTATGAATCAAGAAAATGAGGATAGCCTGGTGCTAAATGACAGTTCCTTTTGTGAAAGTGAAGAAGGGTATCATGGCTGCATTTCATTGCCAAAACTAGAGAAGAAGACTAATGGATCAAAACCACCCAAAGATTTCGTGTGCCCGATCACAGGCCAGCTATTTTGTGATCCTGTCACCCTTGAAACAGGCCAGACCTATGAAAGAAAAGCGATCCAAGAGTGGCTCAGAACAGGAAACACAACTTGCCCCATCACGCGACAGCCTCTATCTGCAAACATTCTACCAAAAACAAATTATGTTTTGAAGAGATTGATAACATCATGGAAAGAACAGCATCCTGAACTAGCTCAGGAGTTATCGAATTCAAACACACCGAGGGGTTCTTCATGTTCTCCCTCTGCAAAAGACACCTCACTGATCTCTATGTTACAAAGAACACCAGACTTCACAACTCATAAGGGAAAAGAAGATCATATAACACAAAGAAGCAGAAGATTCATGCTGCTTGCTGCAACATCTCCAACTAGTGTTCTATCTCAAGCTGCAGTAGAAACAATTATGAATTCCTTGAAACCTTACATTAATAGCCTATGTACTTCAGAAAACTTGGGAGAATGTGAAGAATCCGTGTTGGAAATAGCTAGATTGTGGAAGGACTCAAAGACTGATCCTCAGATTCATTCTTACTTATCAAAGCCAACTATCATAAATGGTTTGGTTGAAATACTTTCGGCTTCTATGAACAGAGAAGTTCTGAGGACTTCTATTTATATTCTTTCAGAGCTAATTTCTGCAGATGAAAGTGTTGGAGAAACACTCAACAGAGTAGATTCTGATTTTGATTGTTTGGCTAATTTACTCAAGAATGGTTTGGATGAGGCTGTTCTTCTTATTTATCAACTAAGGCCGGTTTTCGCTCAGCTTTCAGCACATGAACTTATACCGTCTCTTGTCCACGTGATACAGAAAAAAAATGAGGAACTAGATCATTTGCAGTTAGTTATGGACCCAAAAGACGCCGCCTTAGCGATTCTTGAGCAAATTTTAGTAGGAGGGGATGAATGTAGCAGGTCTCTTAATGCTTTGAGTGTTGTTTCGGCAAATGGAATTCCAGCATTAGTAAATTACTTGGAGAGGATGGAAGGAAGAAGATCTGTTGTTTCTATACTTTTGTGTTGTATGCAAGCCGATAAGAGTTGTAAGAGCTTGATAGCAAACAGAATTGAAATGTCTCCTGTTCTTGAATTATTTCATGCAGGAAATGATAGTGTAAGAGGCATATGTGTTGAATTTCTCTCAGAACTTGTTCAATTGAATAGGAGAACTTTCTGCAACCAAATATTGCAGAATATAAAGGATGAAGGAGCATTTAGTACAATGCATACATTTCTTGTTTATCTTCAGATGGCTCCAATGGAGCACCAACTTGCTGTTGCAAGTCTTCTTCTTCAGCTTGATCTTCTGGTCGAGCCACGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACATTGATTGAAGCACTTTGGCAAAAGGAATTCTCAAATGCTCAAATGAAGGCCTTAGATGCTTTGATATTTCTTATTGGACATGTCACTTCCTCTGGAAAGTCCTATACTGAAGCTTGGTTACTCAAGATTGCAGGGTTTGATCATCATTACAATGTTTTAATGAAGGCTGAACAAATGGGACAATATGACAGTGATTTGGAGGAAACAGAGGAGGATGAGAAAATGGCCATGGACTCTTGGCAGAGAAGAGTAGCTTTTGTACTTTGCAACCATGAGAATGGTTCAATATTTAAAGCTTTGGAAGAATGCTTAAGGAGTAGCTCCTTAGAGATGGCAAAATCTTCCCTTGTTCTTGCCACTTGGCTCACACACATGCTCTCTACTCTTCCAGACACGGGCGTAAGAGACGTGGCTCGCAAGTCATTGCTCGACATACTCATAAATGTTCTTCAGTCATCCAAGAACATGGAGGAAAAGATCCTAGCTACCCTTGCTCTGAATACTTTCATTAGTGATCCAATTGCTCATGAAGCACTTAGAGTTTATGCTAAAAGCATCTACAGAACCTTGAGGAAGCTGAAGAAGTATTCATTTGTGGCAGTTGATATTATGAAAGTCATACTAAATTTAGATTCTGTTGATGTGACTAAGTTGTGGAGTTGTAAAGAAGTTGTTGAGTTAGATTTGAGCTCAAATGGAGAGGTTCTTTCTTTGCTTTATCTGAATGGCCATGTCTTGAGTGGACACTCTGATGGAACTATCAAGGTATGGGATGCAAGGAAAAGAATACCAAGAGTGATTCAAGAAACTCACGAGCACACGAAAGCTGTAACATCTCTGTGTTCTTCAGGCGATCGACTATACAGCGGCTCCTTAGACAAAACCATCCGGGTCTGGACAATTAAATCTAATGAGATTAAATGTATAGATGTTCATGATGTTAAGGAGGCAGTGTATGAGTTAACAGCTAATGCTAAATTGGCATGCTATGTGTCTCAAGGAACTGGAGCTAAGGTATATAATTGGTTAGAAGCTCCAAAGCATATAAACTTTAACAAGTATGTGAAATGCCTTGCTGTTGCTGGGGACAAACTGTATTGTGGTTGCTCTGGTTATAGCATTCAGGAGGTTGACTTGTCCACATATACATCAAATCCATTCTTCTCTGGAACAAGAAAATTGTTGGGGAAACAATCCATACACTCACTTCAAATTCATGATGGTTTCCTCTTTGCTTGTGGTTCTTCTGGTGATGGAACTGCAGGAAAGATATTTTCACTTTCTAGTAGAATGGTGGTCGGATCACTCTCGACTGGACTCGACATCCATCGCATTGCCATCAATAGTGACTTCATATTCGCCGGCACGAAATTCGGCACCATTGAAGTTTGGCTAAAAGATAAGTTCACCCGGGTTGCATCCATCAAAATTGCTGGTGGTAACACAAAAATCACATCATTAGTATCTGATGCAGATGGTATGATGCTTTTTGTTGGTTCTTCTGATGGAAAGATTCAGGTTTGGGCTTTGGATTAA 4458 0.3995 MAGNFRFTMDQKDIVRFLTATIDSFIQDRLINKEQRAQHKEQCAERLAAEDGSCEKETEVEYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKLKTAGVPNFYLSAWAHLNLSYLWKLRNNVQNCVFHALEMFIVDPFFARVDFAPELWKILFLPHMSSIVGWYSEERHRLMMEVIPENSDMSFTADFDQLFNESLVFSMKPNQLDKLQKLEQLYGESLDENTRLYAKYYKDCLNSDSTNGKKVAPMLPIAEPPMTPLHELSRSVPDYVKFGPILPKSAGFSLMLRLKDGENEKSSEEPSIHSKEENSSIWGAKESIIEENEGDSDFELDDASVDSNNKNNNIFSPKMKAMKDDDDIEPKVHLSNQKNQIYSPTISSPLDSPRISHNSSANPDSRSRREPKYLRLLSSRLRDSTISDSLSSSPDMSADHIYSSDNETMVLKNIRRKNSNQLLSMNQENEDSLVLNDSSFCESEEGYHGCISLPKLEKKTNGSKPPKDFVCPITGQLFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSANILPKTNYVLKRLITSWKEQHPELAQELSNSNTPRGSSCSPSAKDTSLISMLQRTPDFTTHKGKEDHITQRSRRFMLLAATSPTSVLSQAAVETIMNSLKPYINSLCTSENLGECEESVLEIARLWKDSKTDPQIHSYLSKPTIINGLVEILSASMNREVLRTSIYILSELISADESVGETLNRVDSDFDCLANLLKNGLDEAVLLIYQLRPVFAQLSAHELIPSLVHVIQKKNEELDHLQLVMDPKDAALAILEQILVGGDECSRSLNALSVVSANGIPALVNYLERMEGRRSVVSILLCCMQADKSCKSLIANRIEMSPVLELFHAGNDSVRGICVEFLSELVQLNRRTFCNQILQNIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLVEPRKMSIYREEAVETLIEALWQKEFSNAQMKALDALIFLIGHVTSSGKSYTEAWLLKIAGFDHHYNVLMKAEQMGQYDSDLEETEEDEKMAMDSWQRRVAFVLCNHENGSIFKALEECLRSSSLEMAKSSLVLATWLTHMLSTLPDTGVRDVARKSLLDILINVLQSSKNMEEKILATLALNTFISDPIAHEALRVYAKSIYRTLRKLKKYSFVAVDIMKVILNLDSVDVTKLWSCKEVVELDLSSNGEVLSLLYLNGHVLSGHSDGTIKVWDARKRIPRVIQETHEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSNEIKCIDVHDVKEAVYELTANAKLACYVSQGTGAKVYNWLEAPKHINFNKYVKCLAVAGDKLYCGCSGYSIQEVDLSTYTSNPFFSGTRKLLGKQSIHSLQIHDGFLFACGSSGDGTAGKIFSLSSRMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKFTRVASIKIAGGNTKITSLVSDADGMMLFVGSSDGKIQVWALD* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1819 1485 ProSiteProfiles Trp-Asp (WD) repeats profile. 1219 1232 IPR001680 GO:0005515
Aev09g1819 1485 Pfam WD domain, G-beta repeat 1214 1232 IPR001680 GO:0005515
Aev09g1819 1485 Pfam WD domain, G-beta repeat 1245 1273 IPR001680 GO:0005515
Aev09g1819 1485 Pfam U-box domain 512 582 IPR003613 GO:0004842|GO:0016567
Aev09g1819 1485 Gene3D - 638 1171 IPR011989 -
Aev09g1819 1485 SMART Ubox_2 514 578 IPR003613 GO:0004842|GO:0016567
Aev09g1819 1485 ProSiteProfiles U-box domain profile. 510 585 IPR003613 GO:0004842|GO:0016567
Aev09g1819 1485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1244 1279 - -
Aev09g1819 1485 PRINTS G protein beta WD-40 repeat signature 1261 1275 IPR020472 -
Aev09g1819 1485 PRINTS G protein beta WD-40 repeat signature 1470 1484 IPR020472 -
Aev09g1819 1485 PRINTS G protein beta WD-40 repeat signature 1219 1233 IPR020472 -
Aev09g1819 1485 MobiDBLite consensus disorder prediction 344 417 - -
Aev09g1819 1485 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 500 594 IPR013083 -
Aev09g1819 1485 MobiDBLite consensus disorder prediction 365 379 - -
Aev09g1819 1485 SUPERFAMILY ARM repeat 660 1146 IPR016024 -
Aev09g1819 1485 SUPERFAMILY WD40 repeat-like 1217 1484 IPR036322 GO:0005515
Aev09g1819 1485 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 1485 - -
Aev09g1819 1485 CDD RING-Ubox_PUB 515 557 IPR045210 -
Aev09g1819 1485 SUPERFAMILY RING/U-box 510 583 - -
Aev09g1819 1485 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 1485 - -
Aev09g1819 1485 MobiDBLite consensus disorder prediction 307 330 - -
Aev09g1819 1485 Gene3D - 1181 1485 IPR015943 GO:0005515
Aev09g1819 1485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1451 1485 - -
Aev09g1819 1485 MobiDBLite consensus disorder prediction 307 321 - -
Aev09g1819 1485 SMART WD40_4 1442 1483 IPR001680 GO:0005515
Aev09g1819 1485 SMART WD40_4 1194 1232 IPR001680 GO:0005515
Aev09g1819 1485 SMART WD40_4 1237 1274 IPR001680 GO:0005515
Aev09g1819 1485 ProSiteProfiles Trp-Asp (WD) repeats profile. 1451 1485 IPR001680 GO:0005515
Aev09g1819 1485 MobiDBLite consensus disorder prediction 380 408 - -
Aev09g1819 1485 ProSiteProfiles Trp-Asp (WD) repeats profile. 1244 1279 IPR001680 GO:0005515
Aev09g1819 1485 MobiDBLite consensus disorder prediction 585 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1819 Aev-Chr9 21885597 21893465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1819 504 902 U-box Gene Family AT1G23030 25.061 9.38e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1819 - - gmx:100776142 2449.08