Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1809 ATGACAACATCAGAACAAGAAGCTTCAACTCTTGAACTGTTGCGCCAACATCTCTTGGGTGATAATCATCACATCTCAGATCACTCCTTCTTCACTACCAATCTCATCCCTGTTGTGAAACTTGAAGAAGCAGAAGAAGAAGATGATGAAGAAAACCCCTTTTCTTCATCATCATCATCTTCATCAGAATTCCTTGATTTGGATTCATATTTCTCATCAGAGCAGTTCAGTTTCAGTGCTTTACTTCAAAGCTCTATAGCTAGCAGCTATGAAGAATCTGAGTATGCAGCAGCAGCAGCAGCAGCAGAAGTTACAGTCCAAAACTCCAACAATATTGCAGAAAGCCCCTTATCATCACCAGGGACCAATTTGCAAAAAACAGAGTTACCAAGTGCAGAGAATAACAAGAATAAGGGGATTATGAGGCACTACAGAGGAGTGAGGAGAAGGCCATGGGGGAAATTTGCAGCAGAAATTCGTGACCCTTCAAGAAAAGGATCAAGGGTGTGGCTTGGAACATTTGACACTGAGATTGATGCTGCTAAGGCTTATGATTGTGCTGCTTTCAGAATGAGGGGCAGAAAAGCAATATTGAATTTTCCTCTTGAGGCTGGTGTTCTATCTGAGTCTATGCCACAGCCTAATATTTCTAGCAGGAAAAGGAGAAGGTTAGTTACTGTAGGGATGAAGTGA 693 0.4185 MTTSEQEASTLELLRQHLLGDNHHISDHSFFTTNLIPVVKLEEAEEEDDEENPFSSSSSSSSEFLDLDSYFSSEQFSFSALLQSSIASSYEESEYAAAAAAAEVTVQNSNNIAESPLSSPGTNLQKTELPSAENNKNKGIMRHYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDTEIDAAKAYDCAAFRMRGRKAILNFPLEAGVLSESMPQPNISSRKRRRLVTVGMK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1809 230 SUPERFAMILY DNA-binding domain 143 202 IPR016177 GO:0003677
Aev09g1809 230 Pfam AP2 domain 143 193 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 MobiDBLite consensus disorder prediction 43 62 - -
Aev09g1809 230 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Aev09g1809 230 CDD AP2 143 201 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Aev09g1809 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 6 223 - -
Aev09g1809 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1809 Aev-Chr9 21815206 21815898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1809 142 223 AP2-EREBP Transcription Factor Family AT5G07580 70.732 5.34e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev09g1809 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1809 - K09286 gmx:100306125 170.629