Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1797 ATGGAGGATACACTTCCCAAGATGGAAATCTTCACCCAAAAGGAATTGCCAATTTATTTCCAAGAAATGGCAATGGGATCAAAGTTTTTGGACAATGCAGCAAATATAAGAAGTTCTAGTTCTCACACACACAAGCACAATACTTCTTTTTTCTCACCTGAAAAGCTTCTTTCAAGTTCAGATTCTATTTCAATGAAAGAAGAGGAGCTGATTAGTCATGTCCCTTTAAAGCTCTATGGCCAAGAGAAAAATCAAACCTTTCCAAGATTCAGTTTCTCTGCCTCAGAAACAGAACATAGCTCCAATAATATTCCTCTAAATCTGTTGGAAACACTTCCTGTATTAACCATAGGACCAGTTTCTGATGAGACTTCTGGATCATCTTCTTTGGTTCCTTCTTCTGATACACACAAATTCCCAAACTTGACCTTGTTTCTGCAGGAACCCTCCTTGCTGTACTCATCACCAACCTCACAAAACAGAGCCTGTGAAGCCATATCAGCAACTTCAGACCCCACATTTCATTTTTCACAGTTTGTTGGTCAAACTCAAATACAGCATCATCAAGCAAGCACTGATTATTCATCACTCAAAATCAGCAACAAGAATCTAACAAAGTCCAAGTCATTCAATGAGAATAGTAATTGGTTGAGTGGAAGTAGGACTCATCATCATCAGCCTCTCAAGTTTGGTGGAAGAGGGAAGCTTTTCAAAGGTGTGAGGCAGAGACAATGGGGGAAATGGGTTGCAGAGATAAGGTTGCCAAGAAACAGGACAAGGGTATGGCTAGGGACATTCGACACGGCCGAAGACGCCGCGATCGCCTACGACACCGCCGCATACATACTAAGGGGAGATTATGCTCAGTTGAATTTCCCAGATATGAAGAATGTGATCAAGGCCAATTCAATGAATGGTACAACTGCTGCACTCGTTGAGGCAAAACTACAAGCAGTTGCAAGGCGTGTTTCAACTCATAAGAAACACAATTCTAATAGTATTGATTCATCACAAGCAATGTCAATATCATCATTACCAATTAATAATAAGCACAATGATGAGGATGGTAAATTGAAATGTAAGAGTAATTGCAAGGATTCAGAATTGATGGAGTTGAAATTTGGTATTGGGGGAAAGGTTGAAAATGAGACAAATGAGAGGAGCAAGAGTGGAATAATTCATCATGAGATGATGTTGGATCATGTGGAAGGTGTTCAGTTGAGTAGAATGCCATCATTGGATATGGACATAATTTGGGATGCACTTTTAGTCTCTGATTCTTCATGA 1287 0.3986 MEDTLPKMEIFTQKELPIYFQEMAMGSKFLDNAANIRSSSSHTHKHNTSFFSPEKLLSSSDSISMKEEELISHVPLKLYGQEKNQTFPRFSFSASETEHSSNNIPLNLLETLPVLTIGPVSDETSGSSSLVPSSDTHKFPNLTLFLQEPSLLYSSPTSQNRACEAISATSDPTFHFSQFVGQTQIQHHQASTDYSSLKISNKNLTKSKSFNENSNWLSGSRTHHHQPLKFGGRGKLFKGVRQRQWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGDYAQLNFPDMKNVIKANSMNGTTAALVEAKLQAVARRVSTHKKHNSNSIDSSQAMSISSLPINNKHNDEDGKLKCKSNCKDSELMELKFGIGGKVENETNERSKSGIIHHEMMLDHVEGVQLSRMPSLDMDIIWDALLVSDSS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1797 428 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 9 426 - -
Aev09g1797 428 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 CDD AP2 235 294 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 Gene3D AP2/ERF domain 236 294 IPR036955 GO:0003700|GO:0006355
Aev09g1797 428 PRINTS Ethylene responsive element binding protein signature 259 275 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 426 - -
Aev09g1797 428 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 Pfam AP2 domain 237 284 IPR001471 GO:0003700|GO:0006355
Aev09g1797 428 SUPERFAMILY DNA-binding domain 236 294 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1797 Aev-Chr9 21732093 21733379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1797 103 428 AP2-EREBP Transcription Factor Family AT4G13620 37.126 1.20e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev09g1797 AP2 2.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1797 - - gmx:100820013 386.341