Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1788 ATGTTGTTGTCATCCGATTCCGATACTCATGGAACGCTTTCAACCTTCGCCTCACAAACCACTCTCTTCCCAAACAAAAACCAATTTTCAACTCCATTTCCCTCTTTTCGGGTTCCTCCAATCCCTACCCCACCAAAAACCAAAACCAAAACCTTTGCATTCGTTCCTCATTACACTAATCTTCCAATTCTATGCCCCAATTTCAGTTTCTGGGCGCACCAACAGGCATTGAGAGATCAATGCTCTATTGTAAATAGTGGTTCGGTGGAGCTAACTATCACATCTTCCACCATGAATAATGAGGCTTATGGAGTTTCAGGCGCGGAATATAAAGATGCAGTGACTGGTTGTTCAGGTGACAAAATCCCCTCTGATAATGATGAGGACAATATATGTATTCTGACAGGTGAAGAGTTTTCTGCTGATTTTTTACGCGACCGGGTTGCTTTAAGGAGATTTCCTGTCACAAATGATGTTGCAGACCAACGCCTTCCAAATAGATTAGATTTCTATGCAAATAATAATTATCAGATGGTTTATGAGGATCTAAATCATGTTCTTGGACTAAGGAGAACGGATTCTGATAGTAACTCAGATTTGTCAGAGTATGCTTCAGCTAAAGGATATTTACCTGAGGTTGACAACAGGGCTTATCCTAATAATTTGAGCAGACTCCATTTCGAACATGGTGGTATTAGACAAGTATCAGGTCAACTTTCTAGACAAGTATCTAGTCTTTCAAGACAAGCATCAGGTAAACTTTCAAGAGAACTATCGGGTAAATTTTCTGAAGGAATTTGTTGTGATCGAGTTCCTTCAGGACCAATTGCTACACCTATTTACGTTGACTCTCCTAAGTCCAGCCATGCATATGGAACGACATTCTCTGAAGGTTCATTATATAAAAAGATAAAGTTTCTCTGTAGTTTTGGGGGAAGAATTCTTCCGAGACCGAATGATGGGAAGCTTAGATATGTGGGTGGTGAAACACGGATTATATCCATTAGGAAGGACAACACATGGGAGGAACTTATGAACAAGACTTTGGCAATTTGCAATCAAGCTCACTTTATCAAATACCAGCTTCCTGGAGAGGACCTAGATGCGCTTATTTCTGTTTGTTCAGATGAGGATCTACATCATATGATTGAGGAGTATGAAGAGCTCGAAAGAGCTGGAGGGTCTCAACGATTACGGATTTTTCTCATTCCATTAACTGAACCTGAGAGTCCAGGCTCTAATGAAGCAAAAGTGAATCCACCAAGTGATACAGATTATCATTATGTTGTTGCTTTAAATGGTATGCTGGAGCGAAGCCCACGAAAGAACTCTAGTGGACAGAATTTGGCAAACCCTTTTGGAAATAACTCTGATTACAACAGTCCAGGTTTCCATAGGGAGTCATCCACACCTGCATTTGCTTTAGAGGTGAAGGATAGCAGCCCAGCCACTCCAAATTTGGGTGGCCTACGGTCAAAACCTGCTGGTCAGTTTTTAACTCCAGTGCAGGTAGCGAGCAAGTTTAATCATATGCCTTCTTTATCGCCCACTTTTGTACAGCCTAAAGATCCTCAAGTTTCTGATGTACAGTTATTCATGGACCATCCATACAATGTTGTCAATGAAAGCACTCGTCCCTTTGTTATGGAAAATGTTCCATATGACAACTCTTTGTATGCGGACAATACCAATTATGTTGATCCAATTGCATACTATAACAATCTTGCTCAAGGGGCTCCATACATGAATTACCATCCTAGTAATCAATATGCAGTGGAGGCTGACCAGTTCAGGAAGCCTAGTGATAATTTTCATTTTCACAGAAGAGAACACAGTAACGAATTTGCCACTTCTGCAATAAATGTTCAAAATGATATGATATATGAGAGACATACAGTTAGCAATGAAAGTTCATATCATTTTGACAATATTGTCTCTCATCCTCAGGAGTCATCAAGTATGCTGCCCATGTCAGATGATAGAGAAGGATCTCAGTACAGAATGCTGCATGCACTTTCCGACTCATCACTTCAGGGGGGTGATGAGAATTTTAGAGTCCACTTGCAACACTTGCAGCTCCCCCGCAGTGCAGCGAAAGACAAATTGCCATTACTGGAAACTTTAAGTCCTTTGGAACAATGTTCAATACAGCCAGGAGAGGCAATTGAGGGGCAGGTACATGAGGTTAAGTATCAAAATTTGACCCCTTTTGGTATGTGTGGCTATGGCAGAAAGGGAGTTTCAGATATCAGTAAAGAGAACTTGCAACATGCAGATAAAAGTTATGATCGGTTTGATGAATATGTTGAAGCTATATCTCGAGACAGTGCCATCGATATAAAGCATCCACAGGGCATCAACTACCAACATGGTGTTTGCTTATCTTCACCTGATCTACAAAGTGGCAACTGCAATGTAACTGCTGCACCATTTAGTTCTTTAGAATCCCCAAGAAAATGGAGGGAGCAACCAACTAGTCTACCATTTGACACAACTGCTTCTGACTTTTCAATGAGGAGCCAAACTTCATCAATGCATGACCAATATGCTATGTCAGATACAAAAGACAACCAGGCACTTCCCCTTGCCTCTTTCAAGTTTCAAACTATTGAGTGCCAAACTAAACTAGAGTCCAGAATGCCTATCTCTTATGTGGACATGGGCGGTTTTTCCACAAGAGAAGTTGTTGTCCCTAGTGAGGATCATGCACTTTGTCTGCACCACAAAGAAGAAAACTCAGGAGTTAACAAACAATCTTGTGGAAACATCAATGACCTTTATAAGCAAGAACCCGTGTCTGTTGTCAAGGGGACAATGGATTGTATTTCTACAGGTCTCCATCCATGCTCTCAAGTCGACTCAAATGTAGACAAAGAGGTTGATGCTGAATCTACATCTCCTGAAAAGGAAGAGGTAGAGAGTTCTTATCAAAAATCTGGAAGTGAGCTCACAAAATCTGATAGTGAAAACATCAATAAGCCTACTGGTGATGCAGCATCTCTTGAAGCAGAGGCTGAAATTTATGGTTTACAGATTATTGAGAATATTGATCTTGAAGATCTGCAAGAGTTAGGATCTGGAACCTTTGGAACTGTTTATCATGGAAGATGGAGAGGAACAGGTGTTGCGATTAAGAGGATTAAAAGTAGTTGTTTCTCTGGTAGATCATCAGAGCAAGAGCGGTTGACTAGAGATTTTTGGAGAGAGGCACAGATTCTATCAACGCTTCATCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGATGGCCCTGGTGGAACATTAGCGACTGTAACAGAATACATGGTGGATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAGAAAGTGCTTGATCGTCGCAAAAGGATCATGATAGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTGCATTTTGATTTGAAGTGTGATAATCTACTTGTTAATCTGGGCGATCCTGAGCGACCTGTATGTAAGGTTGCAGATTTTGGCTTATCTAGAATCAAACGCAACACACTTGTTTCCGGTGGCGTAAGAGGAACCCTTCCTTGGATGGCACCAGAATTGCTGGATGGTAACAGTAGTAGGGTATCAGAGAAGGTTGATATTTTCTCATTTGGCATTACAATGTGGGAAATCTTGACTGGGGAAGAGCCATATGCTAACATGCACTGTGGTGCCATAATAGGAGGTATCGTCAATAATACGCTCAGGCCTTCAATTCCAAAACGTTGTGATTCTGAGTGGAAAAAATTAATGGAAGAATGTTGGAATCCTGATCCTGAAGCCAGACCATCCTTCACAGAAATTAAGAACAGACTTCGCTTCATGTTTGCTTCACTTCAGAGAAAGAGGCCTATTCGATGA 3888 0.411 MLLSSDSDTHGTLSTFASQTTLFPNKNQFSTPFPSFRVPPIPTPPKTKTKTFAFVPHYTNLPILCPNFSFWAHQQALRDQCSIVNSGSVELTITSSTMNNEAYGVSGAEYKDAVTGCSGDKIPSDNDEDNICILTGEEFSADFLRDRVALRRFPVTNDVADQRLPNRLDFYANNNYQMVYEDLNHVLGLRRTDSDSNSDLSEYASAKGYLPEVDNRAYPNNLSRLHFEHGGIRQVSGQLSRQVSSLSRQASGKLSRELSGKFSEGICCDRVPSGPIATPIYVDSPKSSHAYGTTFSEGSLYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKDNTWEELMNKTLAICNQAHFIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLIPLTEPESPGSNEAKVNPPSDTDYHYVVALNGMLERSPRKNSSGQNLANPFGNNSDYNSPGFHRESSTPAFALEVKDSSPATPNLGGLRSKPAGQFLTPVQVASKFNHMPSLSPTFVQPKDPQVSDVQLFMDHPYNVVNESTRPFVMENVPYDNSLYADNTNYVDPIAYYNNLAQGAPYMNYHPSNQYAVEADQFRKPSDNFHFHRREHSNEFATSAINVQNDMIYERHTVSNESSYHFDNIVSHPQESSSMLPMSDDREGSQYRMLHALSDSSLQGGDENFRVHLQHLQLPRSAAKDKLPLLETLSPLEQCSIQPGEAIEGQVHEVKYQNLTPFGMCGYGRKGVSDISKENLQHADKSYDRFDEYVEAISRDSAIDIKHPQGINYQHGVCLSSPDLQSGNCNVTAAPFSSLESPRKWREQPTSLPFDTTASDFSMRSQTSSMHDQYAMSDTKDNQALPLASFKFQTIECQTKLESRMPISYVDMGGFSTREVVVPSEDHALCLHHKEENSGVNKQSCGNINDLYKQEPVSVVKGTMDCISTGLHPCSQVDSNVDKEVDAESTSPEKEEVESSYQKSGSELTKSDSENINKPTGDAASLEAEAEIYGLQIIENIDLEDLQELGSGTFGTVYHGRWRGTGVAIKRIKSSCFSGRSSEQERLTRDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVDGSLRNVLLKKEKVLDRRKRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVADFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSRVSEKVDIFSFGITMWEILTGEEPYANMHCGAIIGGIVNNTLRPSIPKRCDSEWKKLMEECWNPDPEARPSFTEIKNRLRFMFASLQRKRPIR* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1788 1295 Pfam PB1 domain 319 402 IPR000270 GO:0005515
Aev09g1788 1295 SMART serkin_6 1018 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1788 1295 ProSitePatterns Protein kinases ATP-binding region signature. 1024 1045 IPR017441 GO:0005524
Aev09g1788 1295 PANTHER SERINE-THREONINE PROTEIN KINASE 187 1293 - -
Aev09g1788 1295 Pfam Protein tyrosine and serine/threonine kinase 1021 1281 IPR001245 GO:0004672|GO:0006468
Aev09g1788 1295 Gene3D - 322 404 - -
Aev09g1788 1295 SUPERFAMILY Protein kinase-like (PK-like) 1017 1281 IPR011009 -
Aev09g1788 1295 MobiDBLite consensus disorder prediction 952 998 - -
Aev09g1788 1295 SUPERFAMILY CAD & PB1 domains 319 405 - -
Aev09g1788 1295 MobiDBLite consensus disorder prediction 954 976 - -
Aev09g1788 1295 Gene3D Phosphorylase Kinase; domain 1 1012 1105 - -
Aev09g1788 1295 Gene3D Transferase(Phosphotransferase) domain 1 1106 1292 - -
Aev09g1788 1295 ProSiteProfiles Protein kinase domain profile. 1018 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1788 1295 PRINTS Tyrosine kinase catalytic domain signature 1208 1230 IPR001245 GO:0004672|GO:0006468
Aev09g1788 1295 PRINTS Tyrosine kinase catalytic domain signature 1252 1274 IPR001245 GO:0004672|GO:0006468
Aev09g1788 1295 PRINTS Tyrosine kinase catalytic domain signature 1100 1113 IPR001245 GO:0004672|GO:0006468
Aev09g1788 1295 PRINTS Tyrosine kinase catalytic domain signature 1137 1155 IPR001245 GO:0004672|GO:0006468
Aev09g1788 1295 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 187 1293 - -
Aev09g1788 1295 MobiDBLite consensus disorder prediction 977 995 - -
Aev09g1788 1295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1143 1155 IPR008271 GO:0004672|GO:0006468
Aev09g1788 1295 SMART PB1_new 318 405 IPR000270 GO:0005515
Aev09g1788 1295 CDD PB1_UP2 307 403 - -
Aev09g1788 1295 MobiDBLite consensus disorder prediction 438 467 - -
Aev09g1788 1295 MobiDBLite consensus disorder prediction 815 834 - -
Aev09g1788 1295 CDD STKc_MAP3K-like 1024 1281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1788 Aev-Chr9 21673128 21679659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1788 133 456 MAP Kinase Kinase Kinase AT1G16270 37.730 5.29e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aev09g1788 PK_Tyr_Ser-Thr 8.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1788 - - aip:107619554 1588.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1788 09 21673128 21679659 Aev09g1788 09 21673128 21679659 ECH