Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1787 ATGCCGAACATTTATTCCCAATCGGAGCTACACGAATTCAGCAGGAGCTGCAGCAGCGAATCTGAAGTCGAAGTAATCGATTCTGATTCTGTTTCTGATTCCGATTCCGACTGGGACGATGTTGAAGAAGACCCCGATTTCGAAGAAACCGATGCCAAGTTCTCAAACTTATCTCTCACCAACATGTCAAAATCACGAACACGCGTTGTTGAATGTAATGGTCTGGAAGATACAGAGGAAGAACCACAAGTGCTGGATATAACAGCAAATTCTATTGATGATGCAAATTTTAAGAAAGTTGAGGCAATCATCAAAGCTGGACTGCTAGAGAAATTGAAAGTGGAGGAATGCAAGTTGTATCTGCGGAAGAATGGTCTGAGGCTAACCGGAAATAAGGACGTACTCATCCAGCGCATAAAGGAACATCAAGAGATCATAAGTGGCGGAGGCGAGAAGAAGTACCCGCCTTCTAGCTTTGTGTTGAACTGTAAAGGTGATGCATGTGTTGGCGATGTTGTTTTGTTCGAGCAAAATGTTTATGAAATGTTCAATTTAGCATCCAGAAGTGCCAGCGGTCCACCATGTGGAGTAAGGATAGTTGCTGGCCGCATTGTGAAAGAAAGCTATGGCGCTGCCAAGCAGCAGCACACATTTACGATTGAAGTACTCTGGAGCAAGGGGGAAAAGCCTTTATCTCCCCTTCACCCCCTATTGATTAAGGGTCGAAACCTTTACAGGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGGGAAAAGGCAGAATATATTGATTGAAAAACACTCAAGGGGATGTGTTGCTCGGGCTCAGAGAGAAGCAAGAATACAAGAAAAGGAGAAGAGAAAAGCAATTAAAGAAAGCCATAGGGTCTCCAAAAAGGATACAGTAAGGAACCAATGTCAAACACTTCCAAGTAGGCCAACTGACATATCCACCAATCTTGCAAAGCCAGCATTTCGATCTGAAAACTTGGCCTTTTCTGCCAATACAAGAAAAGAAATGCCATCGATTGCAAATAAACCAGCAGATCACCCTGTAACTAAACCGTATGGCGAGTCAATTGGTTTAGGAAGGGTATCACTTGCTGTTCACCCTCCACATTATCATCACCAACCTCGGAATCGCTCGGCTGATTATAGAAGTACTTCTGATGTTGACCATATCAGGAGAGCTGAGCTTAGTTCAAACTACATTGCCCCTAACTTCCATTCAAGAGAAGAAAGAAATTTCGGTGCGAAATACCATCCTTTCAATACTGAGACAAACAGGTTTACAGAGAGGAACTATCATAGACAACCTTTGGGAAGTACAAACCACTTCCCTCCATTAATGAACAACAGAGAAACCTATAAGCAAAAGCAACTATGTAGACACTATGCCCGTGGACAGTGCTATTATGGGGACAACTGCAAGTTTCTACATGATTTGAATTGA 1455 0.4289 MPNIYSQSELHEFSRSCSSESEVEVIDSDSVSDSDSDWDDVEEDPDFEETDAKFSNLSLTNMSKSRTRVVECNGLEDTEEEPQVLDITANSIDDANFKKVEAIIKAGLLEKLKVEECKLYLRKNGLRLTGNKDVLIQRIKEHQEIISGGGEKKYPPSSFVLNCKGDACVGDVVLFEQNVYEMFNLASRSASGPPCGVRIVAGRIVKESYGAAKQQHTFTIEVLWSKGEKPLSPLHPLLIKGRNLYRLKTLRQKWEDEGKRQNILIEKHSRGCVARAQREARIQEKEKRKAIKESHRVSKKDTVRNQCQTLPSRPTDISTNLAKPAFRSENLAFSANTRKEMPSIANKPADHPVTKPYGESIGLGRVSLAVHPPHYHHQPRNRSADYRSTSDVDHIRRAELSSNYIAPNFHSREERNFGAKYHPFNTETNRFTERNYHRQPLGSTNHFPPLMNNRETYKQKQLCRHYARGQCYYGDNCKFLHDLN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1787 484 Pfam CCCH-type zinc finger 462 482 IPR041367 -
Aev09g1787 484 SMART c3hfinal6 458 483 IPR000571 GO:0046872
Aev09g1787 484 MobiDBLite consensus disorder prediction 1 25 - -
Aev09g1787 484 ProSiteProfiles Zinc finger C3H1-type profile. 457 484 IPR000571 GO:0046872
Aev09g1787 484 MobiDBLite consensus disorder prediction 26 49 - -
Aev09g1787 484 SMART sap_9 109 143 IPR003034 -
Aev09g1787 484 ProSiteProfiles SAP motif profile. 109 143 IPR003034 -
Aev09g1787 484 Pfam SAP domain 109 142 IPR003034 -
Aev09g1787 484 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 27 483 IPR045124 GO:0003723|GO:0045892
Aev09g1787 484 Gene3D SAP domain 98 156 IPR036361 -
Aev09g1787 484 MobiDBLite consensus disorder prediction 1 53 - -
Aev09g1787 484 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE 27 483 - -
Aev09g1787 484 Coils Coil 273 293 - -
Aev09g1787 484 SUPERFAMILY CCCH zinc finger 457 482 IPR036855 GO:0046872
Aev09g1787 484 Gene3D - 450 484 - -
Aev09g1787 484 SUPERFAMILY SAP domain 99 143 IPR036361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1787 Aev-Chr9 21668932 21672265 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev09g1787 SAP 9e-10 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1787 - - lja:Lj3g3v2576220.1 506.908