Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1779 ATGAAGGAGAGGGACGAAGAATATGAATACATCGACTGGCGTAGGCAAGGTGCGGGGCTGTGTTGTCGGTGGGTGGTAGCTGTCGGTGCTCGACGGTGGGTGCGACTGTACAAGGATGAGGGTCTAGGATTTCAAAAAGGGGGAAAGAAAGTTACTAGAGAAGATAATGCAAAACAACATCGTTTAAGGGTTTTTGGTTTGTGTGTGGCGATGGCGGATGCACCGACGAGTCCGGCGGGAGGGAGTCACGAGAGCGGCGGAGAGCAGAGCCCGCGGGGGTCTTGTTCCGGCGGCGGAGGAGGAGGGGCGAGGGAACAGGATAGGTTTCTGCCGATCGCGAACATTAGCAGGATCATGAAGAAGGCGCTGCCTGCAAACGGCAAGATCGCTAAGGATGCTAAGGACACTATGCAAGAATGTGTCTCCGAATTCATCAGTTTCATCACTAGCGAGGCGTGTGAGAAGTGCCAGAAAGAGAAGAGGAAGACCATTAATGGTGATGATTTGTTATGGGCAATGGCCACTTTAGGATTTGAAGACTACATAGAACCACTTAAGGTGTACCTAGCAAGATACAGAGAGGGTGACACCAAAGGATCTGGTAGAGGTGGTGATGGCTCTGCTAGACGAGATCAAGTCGGCCTAGCAGGTCAAAATAACCAGCTTATTCACCAGGGTTCACTGACCTATATTAGTTCCCAGACTATTAACATTTTCTGCTATGTGTTTGGAATTGCAGGTGCAGCCACAACACTTGGTTATTCCATCAATGCAAAGCCATGA 783 0.5006 MKERDEEYEYIDWRRQGAGLCCRWVVAVGARRWVRLYKDEGLGFQKGGKKVTREDNAKQHRLRVFGLCVAMADAPTSPAGGSHESGGEQSPRGSCSGGGGGGAREQDRFLPIANISRIMKKALPANGKIAKDAKDTMQECVSEFISFITSEACEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREGDTKGSGRGGDGSARRDQVGLAGQNNQLIHQGSLTYISSQTINIFCYVFGIAGAATTLGYSINAKP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1779 260 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 71 229 - -
Aev09g1779 260 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 71 229 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev09g1779 260 Gene3D Histone, subunit A 101 228 IPR009072 GO:0046982
Aev09g1779 260 ProSitePatterns NF-YB/HAP3 subunit signature. 140 156 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev09g1779 260 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 109 173 IPR003958 -
Aev09g1779 260 PRINTS CCAAT-binding transcription factor subunit A signature 137 155 - -
Aev09g1779 260 PRINTS CCAAT-binding transcription factor subunit A signature 175 193 - -
Aev09g1779 260 PRINTS CCAAT-binding transcription factor subunit A signature 156 174 - -
Aev09g1779 260 SUPERFAMILY Histone-fold 106 205 IPR009072 GO:0046982
Aev09g1779 260 MobiDBLite consensus disorder prediction 76 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1779 Aev-Chr9 21615995 21620375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1779 77 226 CCAAT-HAP3 Transcription Factor Family AT2G37060 73.377 5.79e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev09g1779 CBFD_NFYB_HMF 1.2e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1779 K08065 - gmx:100815883 243.817