Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1775 ATGGAGCAGGAAGAACACGAAGTCTACGGTGCGGACATTCCCGACGAGGCCGACATGGACGCCGACACCGACCTCCACGACCACGACGACGACCAGGAACACCATCCTTCCTCTCACGCTAACAAGGACTTGGAAGACATGAAGAAGAGGCTGAAGGAGATCGAGGAAGAAGCTAGCGCCCTCCGCGAAATGCAGGCCAAGGTCGAGAAAGAGATGGGCGCTGTTCAAGATGCATCTGGATCTTCTGCAAGTCAAGCTGAGAAGGAGGAAGTGGATTCTCGATCAATCTATGTTGGTAATGTTGACTATGCATGTACACCTGAAGAAGTTCAACAGCATTTTCAGTCATGTGGAACTGTGAACAGAGTGACAATACTGACAGACAAATTTGGTCAACCAAAAGGTTTTGCTTATGTAGAGTTTGTTGAGATAGATGCTGTTCAGAATGCTCTCCTGTTAAATGAATCAGAGTTGCATGGTCGACAACTGAAGGTGTCTGCTAAGCGTACTAATGTTCCTGGAATGAAACAGTATTTTGGAAGAAGACCTATGGGTTTCCGATCTAGGAGGCCTTTCATGCCTTCTCCATTCTATCCACCTTATACTTATGGAAGGGTCCCAAGGTTTAGACGACCCACTCGATACAGACCATACTAG 657 0.4734 MEQEEHEVYGADIPDEADMDADTDLHDHDDDQEHHPSSHANKDLEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDASGSSASQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYFGRRPMGFRSRRPFMPSPFYPPYTYGRVPRFRRPTRYRPY* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1775 218 PANTHER POLYADENYLATE-BINDING PROTEIN 1-LIKE 3 217 - -
Aev09g1775 218 CDD RRM_II_PABPs 95 166 - -
Aev09g1775 218 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 3 217 - -
Aev09g1775 218 Coils Coil 37 71 - -
Aev09g1775 218 Gene3D - 15 176 IPR012677 -
Aev09g1775 218 MobiDBLite consensus disorder prediction 1 91 - -
Aev09g1775 218 SUPERFAMILY RNA-binding domain, RBD 84 192 IPR035979 GO:0003676
Aev09g1775 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 164 IPR000504 GO:0003723
Aev09g1775 218 MobiDBLite consensus disorder prediction 27 70 - -
Aev09g1775 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 170 IPR000504 GO:0003723
Aev09g1775 218 SMART rrm1_1 95 166 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1775 Aev-Chr9 21579394 21582439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1775 95 166 Eukaryotic Initiation Factors Gene Family AT2G36660 38.158 5.83e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1775 K14396 - gmx:100527545 326.635