Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1771 ATGGCAGGAAACATGGGTTGGGGTGTGATGGAAGAAGAAGGATGGAGGAAGGGTCCTTGGACTTCTGAGGAAGATAGATTGCTCATTGAGTATGTTAAGCTTCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAAAAGAAATGGGAAGAGCTGCAGATTGAGATGGGTGAATTACTTAAGACCAGACCTGAAGAGGGGTCAGATCACACCACAAGAAGAAAGCATAATCCTAGAGCTCCATGCTAGATGGGGAAACAGTCCCTCCGATGCCGCCGAAAAGGCGAAAAATCGCCTTCTCAGGAGGCAGCAATTTCACCAACAGCAGCAGCAACAACTAATAATGAAGCAGCAACAAGTTCAAATTCAACAGCAGCAGCAAGAAATGATGCAATTCAACTTGGACATGAAAGGGATAATGAACTTGGTTGATCAGGGAAATGACCATACAGTCCCTTCCATATCTCAAGAGACACAACAAGACATGATCAACATCATGTGTAACAACAACATGTATCCAACAAATAACACAAGAGAGGAGCAAGGATACTACTATTCCTCTGCAGCAACAGAGTCCTCTAATGAGGACATTTTCTGGGATGGACTTTGGAATTTGGATGATGTTCTTTGCAATTTCACTGCTACAAGCAAAGCCAGTAGTTTAGTTGCTCCTTTCTGCTAA 693 0.4387 MAGNMGWGVMEEEGWRKGPWTSEEDRLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNSPSDAAEKAKNRLLRRQQFHQQQQQQLIMKQQQVQIQQQQQEMMQFNLDMKGIMNLVDQGNDHTVPSISQETQQDMINIMCNNNMYPTNNTREEQGYYYSSAATESSNEDIFWDGLWNLDDVLCNFTATSKASSLVAPFC* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1771 230 Gene3D - 17 69 - -
Aev09g1771 230 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Aev09g1771 230 SUPERFAMILY Homeodomain-like 18 91 IPR009057 -
Aev09g1771 230 SMART sant 16 66 IPR001005 -
Aev09g1771 230 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Aev09g1771 230 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 91 220 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev09g1771 230 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 90 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev09g1771 230 Coils Coil 119 139 - -
Aev09g1771 230 CDD SANT 19 64 IPR001005 -
Aev09g1771 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Aev09g1771 230 PANTHER MYB TRANSCRIPTION FACTOR 91 220 - -
Aev09g1771 230 PANTHER MYB TRANSCRIPTION FACTOR 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1771 Aev-Chr9 21559243 21560627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1771 12 230 MYB Transcription Factor Family AT3G24310 47.348 1.10e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev09g1771 Myb_DNA-binding 8.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1771 K09422 - gmx:100782089 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1771 09 21559243 21560627 Aev09g1771 09 21559243 21560627 ECH