Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1750 ATGTTGTTCACATTATTTCTCTTGTTACAATGGTTTCAGGAGGAAATTTCAAGCCCAATCAGTGACAGGATTTTTGAGCTGTGTGAGTCAGAACTGTTTCCAGAGGGACTTCAGAACTCAGAAGTGACATCAAGCTCAAATAATTGCTGCTATGATGAGAATTCCTCATATGTAACAAACAATATGTCTCTAGCATTAGATGTAGAAACCAAATATCATAACAATAGCAGCAATAACACATCAGTTACAACTCCAAGTAGCACCACAACCACAAACAATAACACAACCAACAGTAGTAACCTCTCAATCATCTTTGACTCTCAAGAAGAGCTGGACAATGATATCTCAGCCTCCATAGATTTCTCATCCTCACCACCATTCAATGTTCCAACATTTCTCAATCAGCAGCAGCAATTTGACTTCTCAAACTCATTGCATAATCATCATCAGGTTCAGCAGCTAGCAGCATGTTCTGGTGTGGAGGGATTCTCTCAGTATCCAACTGACAATGTTGGACCACTCATGGGGGCTCCATTGCCTTCTGTTTTTGAAGAGGATTGCATAACTTCTGTCTCTTCTTATGTCACTCTTAACCCTTCTTCTCCTTCTTGCTCTTATCTCAACCCTGCTATGGCAGCAGCATACATGCCTCATGCTCCACTCGGCACCGCCTTATCCGCTGACCGTGCCGGCTTGTTTGCTGGGGGGATGCTTCTTGGTTCTGACCTTCAGAGGCAGGATCTTGAATACCAGGGTGAAAATGCTGGAATATATTGCACAGATTCAATTCAGCGGGTATTTAATCCTCAAGAACTTCAGGCACTTAGTACTGAGAATCAGCAATTAGTGGCTGGAGCTGGGAGTTCTGCAAATTTGACACCAGAAATCTCAAACTTGGAGGACTCTTCTTTCAAGGTTGGAAAACTCTCTGTTGAGCAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCGTGCCGGAAAACTCTCGCCGATAGCCGGCCTCGAGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATACTCAGAGACCTGCTAGTAGCAACCATGAAGAAGAAGATGAAGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATATTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAATCCTGGATTTGA 1239 0.4197 MLFTLFLLLQWFQEEISSPISDRIFELCESELFPEGLQNSEVTSSSNNCCYDENSSYVTNNMSLALDVETKYHNNSSNNTSVTTPSSTTTTNNNTTNSSNLSIIFDSQEELDNDISASIDFSSSPPFNVPTFLNQQQQFDFSNSLHNHHQVQQLAACSGVEGFSQYPTDNVGPLMGAPLPSVFEEDCITSVSSYVTLNPSSPSCSYLNPAMAAAYMPHAPLGTALSADRAGLFAGGMLLGSDLQRQDLEYQGENAGIYCTDSIQRVFNPQELQALSTENQQLVAGAGSSANLTPEISNLEDSSFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEEDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1750 412 Pfam CCT motif 314 356 IPR010402 GO:0005515
Aev09g1750 412 MobiDBLite consensus disorder prediction 349 371 - -
Aev09g1750 412 MobiDBLite consensus disorder prediction 75 98 - -
Aev09g1750 412 MobiDBLite consensus disorder prediction 349 381 - -
Aev09g1750 412 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
Aev09g1750 412 PANTHER CCT MOTIF FAMILY PROTEIN 13 412 - -
Aev09g1750 412 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1750 Aev-Chr9 21403056 21405457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1750 294 358 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 1.21e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev09g1750 CCT 5.4e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1750 - - aprc:113871720 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1750 09 21403056 21405457 Aev09g1750 09 21403056 21405457 ECH