Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1726 ATGGATTCCTTCGACGATTTCTTTGATTTCGATTTCATCCAAGATTCTACGCCTGCCTCCACCGATTTCCTTTGGTCCAATCAAAGTGCGAGCACTGAAATTGGCTTCTCAGGTGGTGATGCTGTTGTTAGTCAAGAGAAAACCAGGAAGAGGGGGCGCGCTAGTTCATGTTCAAAGGCTTGCCGCGAGAAGTTGCGGAGGGAGAGACTCAATGAAAGGTTTTGTGAATTGAGCTCTGTTTTAGAGCCTGGGAGACCTGTGAAAACTGATAAAATGGCTGTACTTGATGATGCTATCAGAGTGTTGAACCAACTAAAAGCAGAAGCTAAGGAACTCAAAGAAACAAATGAAAAATTAGTAGAGGAAATTAAATGTTCAAAGGAAGAGAAAAATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAAGAAAGGATCGAGAGGCAGTTGAAAGATTTGCCAGTTCCACCTGCAGGGTTTATGCATCCCAATCTAGCTGCTTATCAAGCAGGGGTCAACAAGGTGGCTGTTTATCCAAACTATGGCTATATGCCAATGTGGCAATATCTTCCTCCATCAACCCGTGATACGTCCCATGATCATGAGCTCAGGCCCCCTGCTGCATAG 630 0.4397 MDSFDDFFDFDFIQDSTPASTDFLWSNQSASTEIGFSGGDAVVSQEKTRKRGRASSCSKACREKLRRERLNERFCELSSVLEPGRPVKTDKMAVLDDAIRVLNQLKAEAKELKETNEKLVEEIKCSKEEKNELREEKLVLKADKERIERQLKDLPVPPAGFMHPNLAAYQAGVNKVAVYPNYGYMPMWQYLPPSTRDTSHDHELRPPAA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1726 209 Pfam Helix-loop-helix DNA-binding domain 59 105 IPR011598 GO:0046983
Aev09g1726 209 PANTHER BHLH TRANSCRIPTION FACTOR 6 209 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aev09g1726 209 PANTHER TRANSCRIPTION FACTOR BHLH104 6 209 - -
Aev09g1726 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 120 IPR036638 GO:0046983
Aev09g1726 209 Coils Coil 95 150 - -
Aev09g1726 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 54 105 IPR011598 GO:0046983
Aev09g1726 209 CDD bHLH_AtILR3_like 59 134 - -
Aev09g1726 209 SMART finulus 60 111 IPR011598 GO:0046983
Aev09g1726 209 Gene3D - 62 142 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1726 Aev-Chr9 21173848 21175878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1726 35 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 63.784 1.59e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g1726 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1726 - - aip:107617845 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1726 09 21173848 21175878 Aev09g1726 09 21173848 21175878 ECH