Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1725 ATGGCCGATCTTGTGAGCAGAAGATACTTGATCTATGTGTCACAATATGATTCACAAGCTATTTCACCAACAACAAGTCAAGGGAGTAGTTCAATGTTCCACCCTCATATGCATTCTTCCAGCACCAGTTTCCCCATCATAGCAATTGCCATAATTGGAATTGTGGCCACAGCATTCTTGCTTGTGAGCTACTACATCTTTGTGATCAAGTGCTGCCTCAATTGGCACCGAATCGATCTCTTGAGGCGTTTCTCTCCCTCGAGGCGGCGCCAAGATCCCTCGGCGATATACTCGCCGGGGCCGGAGCCTCGAGGACTAGATGAGGCTGTGATAAGGCTAATCCCAGTGATTCAATACAAGTCACAGCAGCAGCAGAAACAACAAGAACAAGGGAATAGAGATTATTGTGAATGTGCTGTTTGCTTGAATGAGTTTCAAGAAGATGAGAAGCTTAGGATTATACCAAATTGCAGCCATGTTTTTCACATTGATTGCATTGATGTTTGGCTTCTGAACAATGCAAATTGCCCTCTTTGCAGAACAAGCATTTCCTTAACAAGTAGGTTCCAAATTGACCAGCTTCTCAACAGAAGGCCTAATTCATCTCAAGACCAAGCCTCAAACATGGACAATAATCTCATTGGTGGTTCTGGTGATGATGAAGATTTTGTTGTGATTGAATTAGGAAATGACCATAATAGAGACAATAATAATGCATTATTGGAGTTACCAACACCACCATGTCCTATGATTAGTCCTTCACCAAGGAAGAAAGCAACAAGGAAGCTGCACAAAGTGACAAGTATGGGGGATGAGTGTATTGATATCAGAGCCAAAGATGAACAATTTTCAGTACAACCTATAAGGAGGTCTTTTTCAATGGATTCTTCAGGTGACAGACAATTCTATTTGGCACTTCAAGAAGCATTGCAGCAACATAACAATGAGGTTATTAGCTCCATTGAAGGATGTAGTGCTACTACTAGTAGTAGTTCTAGAGTTAAGAGATCATTCTTTTCATTCGGACATGGAAGTGCTACGCTGCAACTTCAACACTCCATCGACGACGCCATGAAGATAATGGTAGCCATAAGGCGAGTTATCGATTACGCCGTCAAGATCAGAGTCAAGCCCGACAAGACTGGGGTGGTGACGCAGAACGTGAAGATGTCGATGAACCCTTTCTGCGAGATAGCGCTGGAAGAGGCACTCCGAATAAGGGAGTCTGGGTTGGCCTCCGAGGTTGTCGCTGTCAGCATGGGATCCTCTCAGTGTGTTGACACTCTCAGGACTGGTCTCGCTATGGGAGCTGATAGGGGTATTCATGTGGAGGCCAACGATGCCCTTTATCCTCTATCTGTTGCCAAGATTTTGAGGAAGCTTGTGGAGATTGAGAAGCCTGGCCTTATCATTCTTGGCAAACAGGCCATTGATGATGATTGCAATCAAACAGGGCAGATGGTAGCAGCACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCCAAGGTTGTCCTTGATAAAGAGAAACAAGTAGTCACAGTGGACAGAGAGGTTGATGATGGTATTGAGACTGTGTGCTTGAACTTACCTGCAGTAATAACCACTGATCTGAGACTGAACCAACCAAGGTATGCTACTCTTCCCAACATAATGAAGGCAAAATCAAAGCCCATAAAGAAATTCACTCCTGAGGAATTGAATGTGGAAATCAAATCTGATTTGGAGATTGTTGAAGTCAATGAACCTCCAAAGAGAAAAGCAGGGGTTATGGTTTCTTCAGTAGATGAACTTATTGACAAACTGAAAAATGAAGCCAATGTCATCTGA 1827 0.4368 MADLVSRRYLIYVSQYDSQAISPTTSQGSSSMFHPHMHSSSTSFPIIAIAIIGIVATAFLLVSYYIFVIKCCLNWHRIDLLRRFSPSRRRQDPSAIYSPGPEPRGLDEAVIRLIPVIQYKSQQQQKQQEQGNRDYCECAVCLNEFQEDEKLRIIPNCSHVFHIDCIDVWLLNNANCPLCRTSISLTSRFQIDQLLNRRPNSSQDQASNMDNNLIGGSGDDEDFVVIELGNDHNRDNNNALLELPTPPCPMISPSPRKKATRKLHKVTSMGDECIDIRAKDEQFSVQPIRRSFSMDSSGDRQFYLALQEALQQHNNEVISSIEGCSATTSSSSRVKRSFFSFGHGSATLQLQHSIDDAMKIMVAIRRVIDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVAVSMGSSQCVDTLRTGLAMGADRGIHVEANDALYPLSVAKILRKLVEIEKPGLIILGKQAIDDDCNQTGQMVAALLNWPQGTFASKVVLDKEKQVVTVDREVDDGIETVCLNLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKFTPEELNVEIKSDLEIVEVNEPPKRKAGVMVSSVDELIDKLKNEANVI* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1725 608 SMART ETF_2 380 570 IPR014730 -
Aev09g1725 608 SMART ring_2 138 179 IPR001841 -
Aev09g1725 608 PANTHER RING-H2 FINGER PROTEIN ATL16 19 346 - -
Aev09g1725 608 Pfam Electron transfer flavoprotein domain 382 565 IPR014730 -
Aev09g1725 608 Pfam Ring finger domain 137 180 IPR001841 -
Aev09g1725 608 SUPERFAMILY RING/U-box 137 186 - -
Aev09g1725 608 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 358 601 - -
Aev09g1725 608 MobiDBLite consensus disorder prediction 241 263 - -
Aev09g1725 608 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Aev09g1725 608 Gene3D HUPs 358 606 IPR014729 -
Aev09g1725 608 CDD ETF_beta 359 562 IPR033948 -
Aev09g1725 608 ProSitePatterns Electron transfer flavoprotein beta-subunit signature. 514 534 IPR000049 GO:0009055
Aev09g1725 608 CDD RING-H2_PA-TM-RING 137 180 - -
Aev09g1725 608 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 185 IPR013083 -
Aev09g1725 608 PANTHER RING-H2 FINGER PROTEIN ATL16 19 346 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1725 Aev-Chr9 21163372 21171933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1725 35 342 C3H Transcription Factor Family AT1G04360 54.277 3.56e-100 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1725 K03521 - gmx:100806085 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1725 09 21163372 21171933 Aev09g1725 09 21163372 21171933 ECH