Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1721 ATGGATCAGGAGCACCAGAGGGGGAAGCAGGGGAAGGAAGAGGTGAAGTACCGAGGGGTGCGGCGGCGGCCGTGGGGGAAGTATGCGGCGGAGATTAGAGATCCGTCGAAGCAAGGTGCTAGGCTGTGGTTGGGGACATTTGACACTGCTGAAGAAGCAGCAAGAGCTTATGACAGAGCAGCATTCAATTTGAGGAATCATCTTGCAATTCTCAATTTTCCAAATGAGTATTATTCTCAAATTAGGGGTTCACCACCTTATCCACCTCATTTGGCTACACCACCACCACCCTCTTCTATTTCTCAATACCATCATGGTTCTAGTTCTAGTTCTCATCAGCACCAAAGGCATGTTTTTGAGTTCGAATACTTGGATGATAAGGTGTTGGAGGATCTTCTTGAGTCAGAGGAGCAGAAGAAGAAAAAGAAGGGAGATTACTAA 441 0.4717 MDQEHQRGKQGKEEVKYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNLRNHLAILNFPNEYYSQIRGSPPYPPHLATPPPPSSISQYHHGSSSSSHQHQRHVFEFEYLDDKVLEDLLESEEQKKKKKGDY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1721 146 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 PANTHER DNA-BINDING DOMAIN 4 137 IPR044808 GO:0003700|GO:0009873
Aev09g1721 146 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Aev09g1721 146 Coils Coil 129 146 - -
Aev09g1721 146 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Aev09g1721 146 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Aev09g1721 146 PANTHER ETHYLENE RESPONSE FACTOR 4 137 - -
Aev09g1721 146 MobiDBLite consensus disorder prediction 82 116 - -
Aev09g1721 146 MobiDBLite consensus disorder prediction 97 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1721 Aev-Chr9 21133496 21133936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1721 14 140 AP2-EREBP Transcription Factor Family AT3G23230 66.929 9.87e-54 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev09g1721 AP2 4.2e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1721 - - gmx:100793703 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1721 09 21133496 21133936 Aev09g1721 09 21133496 21133936 ECH