Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1719 ATGGATTCCTCTTCCCTCTTCTTCAACTCCCCCACTCCCGAATTCTCCTCGGATCACTCATCCTCCTCCTCCTTTGGCTCTTCCCCGGAGTCATTCTCGTTCAATTGGGATCAGTACCTCCCATTTAACGAGAATGACCCCGAGGAGATGCTCCTCTATGGCATGATCGCCACTGCCAACACACCTCATCAGCCACCTTTCGAGCCGGCCAAGAGGGTGAAGGAGGAGGAGGTGAGCTCCGACGGCGATAATTCCATAGAAAGGAAGGAGAAGTCGTACCGAGGAGTCAGGAGAAGACCATGGGGCAAATTTGCGGCCGAGATAAGGGACTCGACGAGGCACGGCATAAGGGTGTGGCTGGGGACATTCGACAGCGCGGAAGCGGCGGCTTTGGCTTATGATCAAGCTGCTTTTTCCATGAGAGGGTCAGCGGCAATTCTGAATTTCCCTGTTGAGACAGTGAGGGAATCACTTAGGGAGATGAATTGTGGTGAAGTTGAAGATCAAGGGTGTTCCCCTGTTGTTGCCCTGAAGAGGAAGCACTCTTTAAGGAGGAAAATTGGTGTCAAGAAAAACAACAAAGAGAATCATAATGTTAGGCTTGACAATGCTGTGGTGTTTGAGGATCTTGGTGCTGATTACTTGGAACAATTGCTTATGTCATCTGATCAGAATCCTACTCCTTGGTGA 690 0.5029 MDSSSLFFNSPTPEFSSDHSSSSSFGSSPESFSFNWDQYLPFNENDPEEMLLYGMIATANTPHQPPFEPAKRVKEEEVSSDGDNSIERKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVETVRESLREMNCGEVEDQGCSPVVALKRKHSLRRKIGVKKNNKENHNVRLDNAVVFEDLGADYLEQLLMSSDQNPTPW* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1719 229 CDD AP2 91 151 IPR001471 GO:0003700|GO:0006355
Aev09g1719 229 MobiDBLite consensus disorder prediction 1 30 - -
Aev09g1719 229 MobiDBLite consensus disorder prediction 63 86 - -
Aev09g1719 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 35 221 - -
Aev09g1719 229 Pfam AP2 domain 92 142 IPR001471 GO:0003700|GO:0006355
Aev09g1719 229 Gene3D AP2/ERF domain 91 152 IPR036955 GO:0003700|GO:0006355
Aev09g1719 229 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Aev09g1719 229 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Aev09g1719 229 PANTHER DNA-BINDING DOMAIN 35 221 IPR044808 GO:0003700|GO:0009873
Aev09g1719 229 SUPERFAMILY DNA-binding domain 92 152 IPR016177 GO:0003677
Aev09g1719 229 MobiDBLite consensus disorder prediction 68 86 - -
Aev09g1719 229 ProSiteProfiles AP2/ERF domain profile. 92 150 IPR001471 GO:0003700|GO:0006355
Aev09g1719 229 SMART rav1_2 92 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1719 Aev-Chr9 21105764 21106453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1719 40 227 AP2-EREBP Transcription Factor Family AT3G23240 60.733 5.91e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev09g1719 AP2 8.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1719 K14516 - gmx:100790598 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1719 09 21105764 21106453 Aev09g1719 09 21105764 21106453 ECH