Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1697 ATGAATTCAGAGAAGCAAGTGATGAGGTATGAGATCTCAAGTGATGATGAAGATGACCACAACCAAGAATTAGCACAAGATCATGATAGTACTATTATGATTGGAGGAGGAACAATAAAAAGATCCTATGATTGCACATTTTGTAAGAGAGGTTTCACAAATGCTCAAGCTTTAGGAGGTCACATGAATATTCATAGGAAGGACAGAGCAAGGTCCAAACAAGTCATCACACCAAATAATAACTCTTCCTCGTCATCACTACTACTCCAAAACACTACCAATGAAGAGGAATTCATGGTCCTTCCTAATTTTTCTTCAGAATTTTCAAACCAATTCCCAACAAGGAATTACTCAATTTTGGAGTCTCAAAGGAATAATTGTGACATGTCATCATATTTTCATCAACCACCACCATCATCTAATAGTTACCTTGGGAACCAATATGCACATGGCTTTCAATATCATCATGAGGTTCATAATAACCTAAGGTCTCAGCCTGTGAATTTCAACGATGAATTTGGTGGTGCCAATTTGAGTCTCCAAATTGGTCCAAGTCATGTGGATAATGCTAAAGGGACTCAAAAAAATGGTGAAGTGGATTTGGAACTCAGGCTTGGCCATGATCCATGCTGA 633 0.3807 MNSEKQVMRYEISSDDEDDHNQELAQDHDSTIMIGGGTIKRSYDCTFCKRGFTNAQALGGHMNIHRKDRARSKQVITPNNNSSSSSLLLQNTTNEEEFMVLPNFSSEFSNQFPTRNYSILESQRNNCDMSSYFHQPPPSSNSYLGNQYAHGFQYHHEVHNNLRSQPVNFNDEFGGANLSLQIGPSHVDNAKGTQKNGEVDLELRLGHDPC* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1697 210 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Aev09g1697 210 PANTHER OS07G0101800 PROTEIN 15 209 - -
Aev09g1697 210 MobiDBLite consensus disorder prediction 1 22 - -
Aev09g1697 210 SUPERFAMILY beta-beta-alpha zinc fingers 40 69 IPR036236 -
Aev09g1697 210 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 209 - -
Aev09g1697 210 Gene3D Classic Zinc Finger 14 98 - -
Aev09g1697 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1697 Aev-Chr9 20903855 20904487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1697 37 104 C2H2 Transcription Factor Family AT3G53820 47.059 4.95e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g1697 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1697 - - vun:114191365 166.777