LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g1675	ATGGCATCCAACAACAACTTCCCTAGCTTCAACCAAAATGGTGTGGTCACTAACACCCCAAACCATCCTCTTGTTTGTAAGGTGTGCACTCAAGCTTTCCCTAATATCCAAGCATTCTTAAGCCACACTGAAACCCATATTGATCAAGGTAGCCTCTCTAGGGAAAGGACATCATTGTCACAAAACTTTATCAATTATCAAAGACAGTTGATATCCAATTTTCCTGTGCCCTCATTTATGCAAGAAAATAGGGTAATTAGAAGGGCCAATTCTACTAGGGCAAGCCCTAATGCCTATAATATAGATAGGATTGGTATGTCACAACCAATGGTTAGGCCTCACCGAATTCCACCAGAGATTATGCCATCAGCTGCTCGAAGTAATTATGAAATGTTGGCTCACTTGGCAACTAGACCAATCTACACTCAAGAGGAGGAGATGGAAATTTCACCAATTGATGGGACCAAGGCATTGATCAACAAGCTTGACATACCAATCAATAATAATAGTTTCATTAATATGCTTGACATGAATAATGAATTGTTTGCACTGGATCTGGATTTAAAGCTCTAA	573	0.3962	MASNNNFPSFNQNGVVTNTPNHPLVCKVCTQAFPNIQAFLSHTETHIDQGSLSRERTSLSQNFINYQRQLISNFPVPSFMQENRVIRRANSTRASPNAYNIDRIGMSQPMVRPHRIPPEIMPSAARSNYEMLAHLATRPIYTQEEEMEISPIDGTKALINKLDIPINNNSFINMLDMNNELFALDLDLKL*	191

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g1675	190	ProSitePatterns	Zinc finger C2H2 type domain signature.	26	46	IPR013087	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g1675	Aev-Chr9	20697937	20698509	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Aev09g1675		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g1675	K20210		-	mtr:MTR_1g075780	64.6994