Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1666 ATGCCGCGACACCACTGTCGTAGGAGCAACATGCGGCCACGGCGCCACGGTGGGTGTCGGATATCGCAAGGTAGTCGCATGATGAGTATCGCCTTGGACCTCCTTTCTCAAGCACCGAGCCACCTTTCCATCACCGCTGACAACAACGTCAACGCCTCCTCCATGGATGAGGATCATCATCACTACTACGCCTCATCGGGCCAATCCAAGGGCGAGTTGCTGTTCCAGCAGGTCAGTTATGGGAACATCGATGGGATCAAGGCCCTTCATAGAGAAGGTGCAGGCCTAGAGTGGATGGACAGAGAAGGAAAGACAGCCTTGATTGTTGCTTGTATGAACCCTGAGCTTTATAATGTTGCCAAAACTTTGATTGAACTTGGAGCCAATGTCAATGCATACCGTCCAGGTCGTCATGCTGGAACTCCATTGCATCATGCAGCAAAGAGGGGGCTTGAAAGTATTGTTAAGTTACTTCTTTTGCATGGAGCTAATCCTTTGGTCTTGAATGATGATTGTCAAACTGCTCTTGAGGTTGCCAGGGTGAAAGGGCACAGCAATGTCGTAAGGGCAATTGAGAGTCATCTATGCTTGTTCTCTGGTTGGTTGCGAGAGTTTCATGGACCTGGGTTTCTAGAAGTGCTAGCTCCTCAGTTGGTATCTAGAAAAGTTTGGGTAGTTGTTTTACCAGTTGGCTCCCGTAATCTTACGAGGCCTTACAAGTTGGAGCTTGTCATATATTCTACTTTGCAGGATGCACAACCACGTACTATTATTGCTCTGTGGAAGGCTAATTTAGAAGAACCTAAGCTTCACCAGTCTGATCCATCAGTGTCAATTGTTGATCCCACTACCAGAACACGTGTTAAACTTGGTCCTGCTAGTGAGAATGACAGGCATCAACTTACATGGTTTTCTAATGCTTGCAAAGGAATTCCACAGGCAAATCCGGCATTTTTGCAAAGTAACGCAACTACAGCTCTGCCCACAGCACCGCCAGATGGAGAAGATGCAGAGCTGGCTATGGCCATCAGTGCATCCCTCCAGCATGCCATTCAGGAGAGACCACCTATCTCACCTGCTCAGTTAAACTATGAAGCAGCAAGTTCTTCAAGCGGCGTAGTCAACCCTAGCGCGCACAGTTTTCTGGGTACCCCGAATGCAAAAACAAGCGACAGTGAGCCTGTACACGAGGCTAATCCAGGTGGCAATAATCAGCATGTCCAAATCCATGACAACGTCACCAGCGGTCCAGGTTTCAATCCATCAGCTCCTCCAATTGCCGATGATGTTCCGATGGATGGCCCCATTCAGTATCCTTCAATTGACTTGAGCCCTATAGATATGTCATCTCCAGTTGTCGAAAACCCGCCTAAAGAAGAAAAGGATGCTGGCGGAAGCGGTTCATCATGCGTGATATGTCTGGATGCTCCGGCAGAGGGGGCATGCATACCATGTGGCCATGTGGCCGGATGCATGTCTTGCTTGAATGAGGTCAAGGCAAAGAAATGGGGTTGTCCAGTATGTCGAGCAAAGATAGACCAAGTCATAAAGATATATCATGTTTGA 1566 0.484 MPRHHCRRSNMRPRRHGGCRISQGSRMMSIALDLLSQAPSHLSITADNNVNASSMDEDHHHYYASSGQSKGELLFQQVSYGNIDGIKALHREGAGLEWMDREGKTALIVACMNPELYNVAKTLIELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLLHGANPLVLNDDCQTALEVARVKGHSNVVRAIESHLCLFSGWLREFHGPGFLEVLAPQLVSRKVWVVVLPVGSRNLTRPYKLELVIYSTLQDAQPRTIIALWKANLEEPKLHQSDPSVSIVDPTTRTRVKLGPASENDRHQLTWFSNACKGIPQANPAFLQSNATTALPTAPPDGEDAELAMAISASLQHAIQERPPISPAQLNYEAASSSSGVVNPSAHSFLGTPNAKTSDSEPVHEANPGGNNQHVQIHDNVTSGPGFNPSAPPIADDVPMDGPIQYPSIDLSPIDMSSPVVENPPKEEKDAGGSGSSCVICLDAPAEGACIPCGHVAGCMSCLNEVKAKKWGCPVCRAKIDQVIKIYHV* 522
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1666 521 ProSiteProfiles Ankyrin repeat profile. 102 135 IPR002110 GO:0005515
Aev09g1666 521 SUPERFAMILY RING/U-box 463 515 - -
Aev09g1666 521 SMART ring_2 470 508 IPR001841 -
Aev09g1666 521 PANTHER ROLLING PEBBLES, ISOFORM B 67 521 - -
Aev09g1666 521 SMART ANK_2a 102 132 IPR002110 GO:0005515
Aev09g1666 521 SMART ANK_2a 138 167 IPR002110 GO:0005515
Aev09g1666 521 MobiDBLite consensus disorder prediction 370 441 - -
Aev09g1666 521 ProSiteProfiles Ankyrin repeat region circular profile. 102 132 - -
Aev09g1666 521 ProSiteProfiles Ankyrin repeat profile. 138 170 IPR002110 GO:0005515
Aev09g1666 521 Pfam Ankyrin repeats (many copies) 123 179 IPR002110 GO:0005515
Aev09g1666 521 Pfam Zinc finger, C3HC4 type (RING finger) 468 515 - -
Aev09g1666 521 MobiDBLite consensus disorder prediction 446 465 - -
Aev09g1666 521 ProSiteProfiles Zinc finger RING-type profile. 470 509 IPR001841 -
Aev09g1666 521 ProSiteProfiles Ankyrin repeat region circular profile. 138 164 - -
Aev09g1666 521 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 450 520 IPR013083 -
Aev09g1666 521 SUPERFAMILY Ankyrin repeat 72 196 IPR036770 -
Aev09g1666 521 MobiDBLite consensus disorder prediction 370 419 - -
Aev09g1666 521 Gene3D - 39 207 IPR036770 -
Aev09g1666 521 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT35, PUTATIVE-RELATED 67 521 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev09g1666 Aev-Chr9 20596815 20604842 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1666 462 518 C3H Transcription Factor Family AT3G06140 36.842 2.02e-09 57.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1666 - - gmx:100789309 738.799
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1666 09 20596815 20604842 Aev09g1666 09 20596815 20604842 ECH