Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1653 ATGACAGCTCGTGTTTCTCTGAGAGTTGAGGAAATCGCAGCTCAAAAAACGGTTACATGGGAATTGAAGAAGATGATAGTCGCAGCTCGTGTTTCTCTGGGCGAAGAAGGTGAAGGCTTTGTGGGATTAATTGACAAGCCAAAAATGGCAACTTTGCTGGGAAAGGAACATGGTTTGAACCTCAAGGAGACTGAGCTCTGTCTCGGCCTGCCTGGCGGTGGCGGTGGCGGTGGTGGTGGTTCTGAGGTGGAAACACCAAGGGCCACCGGGAAGAGAGGGTTCTCTGAGACAGTTGATTTGAAGCTCAATCTTCAAGCTGATAACAACAAGGAAGAAGATCTGATGAATGAGAATAATCTCAAGAATGTCTCAAAGGAGAAGACCCTCCTTAAGGACCCTTCCAAGCCACCAGCTAAGGCTCAAGTAGTTGGGTGGCCGCCAGTGAGGTCATACAGGAAGAACATGATGGCACAGAAAGTGAGCAATGAGGAAGGAAATAGTGAGAAGAAGACAAGTGGTGGAACAAGTAGCAGCAGCAACAACAATAGTACAAATAATGGAGGTGGTGCTGCATTTGTGAAGGTGTCAATGGATGGAGCTCCTTACCTTCGCAAGGTGGACTTAACAATGTACAAAAGCTACCAACAATTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAACTATGGGACCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTCGTCGGTGATGTCCCTTGGGAGATGTTTGTTGGGTCATGCAAGCGCCTCCGAATAATGAAAGGATCAGAAGCTATTGGCCTTGCGCCAAGAGCTATGGAAAAATGCAAAAGCAGAAGCTGA 927 0.4693 MTARVSLRVEEIAAQKTVTWELKKMIVAARVSLGEEGEGFVGLIDKPKMATLLGKEHGLNLKETELCLGLPGGGGGGGGGSEVETPRATGKRGFSETVDLKLNLQADNNKEEDLMNENNLKNVSKEKTLLKDPSKPPAKAQVVGWPPVRSYRKNMMAQKVSNEEGNSEKKTSGGTSSSSNNNSTNNGGGAAFVKVSMDGAPYLRKVDLTMYKSYQQLSDALAKMFSSFTMGNYGTQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKSRS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1653 308 MobiDBLite consensus disorder prediction 157 186 - -
Aev09g1653 308 Pfam AUX/IAA family 63 299 IPR033389 -
Aev09g1653 308 SUPERFAMILY CAD & PB1 domains 180 289 - -
Aev09g1653 308 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 55 301 IPR003311 GO:0005634|GO:0006355
Aev09g1653 308 PANTHER AUXIN-RESPONSIVE PROTEIN IAA7 55 301 - -
Aev09g1653 308 ProSiteProfiles PB1 domain profile. 190 290 IPR000270 GO:0005515
Aev09g1653 308 Gene3D - 185 301 - -
Aev09g1653 308 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1653 Aev-Chr9 20471531 20481511 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1653 168 298 B3 DNA Binding Superfamily AT4G23980 29.771 1.10e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev09g1653 AUX_IAA 7e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1653 K14484 - gmx:100810762 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1653 09 20471531 20481511 Aev09g1653 09 20471531 20481511 ECH