Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1645 ATGGTGGGACTTGAGATCATACCTATAGGCACAATTTTAGCTGTGCTAACCAGCCAGGTCTTGAAAACAGCTCATGCAGCGGCCGATGTTCTTATCGGCAAAGAAAGTTTCAAGGTCCTTTCCAAACACCTGTTTGATATTGAGCCAGTGTTGAAGGAATTGCAGACTCAGGAACTCAATGAATCTCAAGCTGCAAGAGTTGCTCTTGAATCTCTTGAAGAAGATGTTAAAAGGGCGAATAGTTTGATCGAGAAGTATAGGAACCGTGGCCGATTTTACTTGCTGTTTAAATGCAGATACATAGTTGAGGAGGTTGAACTAGTCACAAGGGATATTGGGAAGTCTCTGGCTGCACTTTCTCTAGCAAACACTGAAGTACTATCAAGAATTTCTGATCAGGTTGATAGATTGCAAAATGAGATGCAGAGAGTGCAGTTGGAGGCTTCACAATCTCAGCTTCAAATTGTCGAGAAGTTGGATCAGGGACTTAGGGAGCAGAAGCTAGATCAGGCTTTTGCGAATGACATGCTCGAGGAGATAGCGAGGGCTGTTGGTGTGCCGGTGGAGCCTTCTGAGATAAGCAAAGAGATGGCCAGCATTAGGAAGGAAAAAGAGGAAGCTGCTAACCGAAAAGAAAGAGCTGAGTTCATTTTCTTGGAGCAGATTATTGAATTACTCTCTAGAGCTGATGCAGCTAGGGACTATGAAGAAGTTAAGAAGCAGTACTTTGAGAGGGTTCAGAAGATAGAGAGATATGATTCAAGGGAAAAATATATCCAACCACTTAATCCGTTCCTTTGTTCGATAACTGGAGCTGTTATGGTTGATCCTGTTAGCCTTATAACTGGTACTACATGTGAGAGATCAGCCATTGAAGCTTGGTTTTACGACGGGAATAGGACTGACCCGGAAACTAAGAATGTTCTTGAAGATACTACCTTGAGGTCTAACACTCCACTGAGGCAATCGATAGAAGAATGGAGAGAGCTTAATTCCTGTCTTGAAATAAGGTCTATAAAGGAAAATTTGTTATCAAATTCTGAACTGGTAGGGTCTCTGAGCCAAATGCAGGCTCTCATAAGAGAGAATTCCATTAACAAGGATTGGATTTCGATCGGAGGGCTTATTGATGCTGTTATCTCTATCCTTGGGAAGACTGATACTATTGAAGTGAAGATGAAGATTTTGGTTACTTCGATGGATGTTGTAGAGGGGCATGCAAGGAATAAGGAGAAATTGGTTGAGTCTCCAGGATGGGATCACATTATTTCCTGCTTGAGGCATGATTCTAGCATTTCGAAGGCAGCGATCGATTTGCTGTATGAGTTGCTTCAACACCGATCCGGTTGGAATGAGTGTTTCTGCAAAAAACTCTCTCAGAATCACAATGCAATTCCTTTCCTTGTCGCCCTTCGTAAGAGACCTGTCAATGGTTCAGCTGAGGTTGCAGAGAAAATTTTGAAGAAGCTTTTTGAAATAAATGAGGAGAGTATTACCACTGCTGCTAGATTTGGCTGGTATAAACCGCTCGTTGATCGTATGATTCAAGGACCAGATTCAAGAATATCGATGGCAAAAGACATAGTGAACTTGGAGTTGAATGTCCTAGACTTGAAGCTCCTTGGTGAGGAAGGAGTTATATTACCTTTGCTAGAAATGTTGTCTGGAAATATCGAATCAAAAAACTCGTCACTATCAGCGCTGGTTAAACTAGCAAGATGCCATGCCAATAAGGGAACAATTGCTGCATCTGGAGGAGTTCCTCTCATTCTAGATTTAATGTTCTCTGCGAGGATGAGGACTTTCATTACCATTAAATGTTGCGAAATCATTGAGATGCTTTCTTCTGATGATGATGGAATTGACTACTTTGTAGATGGAGAAGGGAAACAACTCGAATTGGATTCCATCATCACCAATTTGCTAGCTTTGCAGCAGAGTTCTAATTCGGGCTACAACTTCCGGAAGCCTGCGATGCGCGCTCTTCTTGGCATTTGCAAGTTTGAGACCAGTTTAGTGAAGAAGGCAATTCTTGCAGCCAATGGTGTGTCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAATCCGTGAGACAGCCATAAACCTGCTCTTTCTTTTCTCTCAACACGAGCCGGAAGGAGTAGTTGAGTACCTCTTCAAGCCTAGAAGGCTTGAAGCTTTGATTGGATTTCTTGAGAATGATGACAATGACAATGTAAGGATGGCTGCTGCTGGTTTACTAGCCAACCTACCGAAATCAGAACGAGAACTCACCACAAAGTTGATTGAACTAGGTGGACTCGATGCGATATTAAGCATTCTGAAAACCGGCACAATGGAAGCCAAAGAGAATGCTCTGAGTGCACTCTTCAGATTCACAGATCCTACAAACATTGAATCGCAACGCGATCTTGTTAAACGTGGAGTATATCCTTTACTTGTGAACTTTCTCAACACCGGTTCAATCACAGCAAAGGCAAGAGCGGCAGCATTCATTGGTGATCTATCAATGAGCACTCCAAAGCTCACAATTGTTTCCAAATCAACCAGTTGTTTGTTCTTCAAGCCATCACGACGAGTTCCCTTATGTTCAGCACACGGCAGTATATGCAGTGTGACTAACACATTCTGCCTCTTGGAAGCAAATGCTTTACCTGGACTGATAAAGCTTTTGCATGGAGAGGTTCATGCAACTGCATATGAAGCAATTCAGACACTTTCCACATTGGTTTTGGAGGATTTTCCTCAAAGGGGTGCACGAGTGTTGCATCATTCAAATGCAATCAGACCATTATTGGATATTTTGAATTGGGGCACTGAATCTCTAAAAGCAGAAGCATTAGGACTCTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTTGATTACTATGGAACAACAGCTAGATTGCGCCTAATTAATCTCACTGGGATGAATATATATGGAGATGGACACCTCAGGAGAAAAGCTGCTAAGGTACTGTCTTTGCTTGAGAGATATTCAAAGTCATCATCATCTGCTATCTCTGGAGTTCCTGAATTCTTGGCCACTCAAAGGTTGGATCAATTTGGTGAAACTCATTTGTAA 3090 0.4217 MVGLEIIPIGTILAVLTSQVLKTAHAAADVLIGKESFKVLSKHLFDIEPVLKELQTQELNESQAARVALESLEEDVKRANSLIEKYRNRGRFYLLFKCRYIVEEVELVTRDIGKSLAALSLANTEVLSRISDQVDRLQNEMQRVQLEASQSQLQIVEKLDQGLREQKLDQAFANDMLEEIARAVGVPVEPSEISKEMASIRKEKEEAANRKERAEFIFLEQIIELLSRADAARDYEEVKKQYFERVQKIERYDSREKYIQPLNPFLCSITGAVMVDPVSLITGTTCERSAIEAWFYDGNRTDPETKNVLEDTTLRSNTPLRQSIEEWRELNSCLEIRSIKENLLSNSELVGSLSQMQALIRENSINKDWISIGGLIDAVISILGKTDTIEVKMKILVTSMDVVEGHARNKEKLVESPGWDHIISCLRHDSSISKAAIDLLYELLQHRSGWNECFCKKLSQNHNAIPFLVALRKRPVNGSAEVAEKILKKLFEINEESITTAARFGWYKPLVDRMIQGPDSRISMAKDIVNLELNVLDLKLLGEEGVILPLLEMLSGNIESKNSSLSALVKLARCHANKGTIAASGGVPLILDLMFSARMRTFITIKCCEIIEMLSSDDDGIDYFVDGEGKQLELDSIITNLLALQQSSNSGYNFRKPAMRALLGICKFETSLVKKAILAANGVSLILPLLDDSDSEIRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVRMAAAGLLANLPKSERELTTKLIELGGLDAILSILKTGTMEAKENALSALFRFTDPTNIESQRDLVKRGVYPLLVNFLNTGSITAKARAAAFIGDLSMSTPKLTIVSKSTSCLFFKPSRRVPLCSAHGSICSVTNTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEDFPQRGARVLHHSNAIRPLLDILNWGTESLKAEALGLLEKVFVSKEMVDYYGTTARLRLINLTGMNIYGDGHLRRKAAKVLSLLERYSKSSSSAISGVPEFLATQRLDQFGETHL* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1645 1029 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Aev09g1645 1029 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 1011 - -
Aev09g1645 1029 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Aev09g1645 1029 Gene3D - 850 1013 IPR011989 -
Aev09g1645 1029 Gene3D - 344 533 IPR011989 -
Aev09g1645 1029 SMART arm_5 534 573 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 873 913 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 756 796 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 917 957 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 712 754 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 406 445 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 574 616 IPR000225 GO:0005515
Aev09g1645 1029 SMART arm_5 670 710 IPR000225 GO:0005515
Aev09g1645 1029 Pfam U-box domain 265 331 IPR003613 GO:0004842|GO:0016567
Aev09g1645 1029 Gene3D - 534 849 IPR011989 -
Aev09g1645 1029 Coils Coil 127 154 - -
Aev09g1645 1029 SUPERFAMILY ARM repeat 369 713 IPR016024 -
Aev09g1645 1029 Coils Coil 62 89 - -
Aev09g1645 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 342 IPR013083 -
Aev09g1645 1029 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 1011 - -
Aev09g1645 1029 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Aev09g1645 1029 Coils Coil 197 217 - -
Aev09g1645 1029 Gene3D - 9 124 IPR036537 GO:0007166
Aev09g1645 1029 SUPERFAMILY ARM repeat 634 1002 IPR016024 -
Aev09g1645 1029 SUPERFAMILY RING/U-box 247 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1645 Aev-Chr9 20368757 20372303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1645 265 971 U-box Gene Family AT1G76390 27.464 6.46e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1645 - - gmx:100783638 1579.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1645 09 20368757 20372303 Aev09g1645 09 20368757 20372303 ECH