Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1624 ATGGAGGAAAAGGAGAATTTTGGTTCTGGGCATACAGTGGTTGGTGGTGGTGGTGGTGCCCCAGAAAGCTTCCACGTCTCTCCCAGGATTGAGACACTAGATTTTTCGAGTGCCGGTGTTGCGCCGGCACCGGCACCGGGGACTGATGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGGCCGGACGGCAAGGTAGCGGCTGGGTCAGCCGCCGGGGCGCTGTCGCCGATGCCGATATCTGCATCGATTCCATTGACCGGAGAGTTCTCAGCCTGGAAAAGGGGTAGAGGGAGGCCTGTTGAATCTATCAAGAAGTCATCATATAAGTATGAATTTGAAAGTCCACCACCAGGACCAGGTGACGGAATCCAATACTCAGTTGGTGCCAATTTCACACCACATGTGCTTACGGTTAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTTCAAGAAGGTTCGCGTGGCATATGCATACTATCTGCTAATGGCACGATATCAAATGTTACACTTCGTCAACCCACTTCTTCTGGGGGCACTTTAACGTATGAGGGGCGGTTTGAGATTCTTTCCTTGTCCGGTTCCTTTATGCCAAATGAGAATGGAATTACGAGAAGCAGATCCGGTGGGATGAGCGTCTCGTTGGCTGGTCCAGATGGTCGCGTAATGGGAGGAGGACTCGCAGGTTTGCTCATAGCTGCAGGTCCTGTTCAGGTTGTTGTCGGAAGTTTTCTTCCTGGTCACCAGCTGGAGCATAAAGCGAAGAAGCCAAGGGTGGAGCCGATATCAACCATCGCCCCGACACATGTCAATCCCGTAATCTCTAGCGAGGAAATAAGAGTCAATTTCGGCGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAACATTGTTTCTTTCAACAATGTTCAAGACTCTAGGAACTCATCTGCTGATGATAAAGGTCCTTTACCCGAAAAGGAGTCTAACCCAAGCCTATCGAATCCTGAGGTTGCATGCTAA 1017 0.5005 MEEKENFGSGHTVVGGGGGAPESFHVSPRIETLDFSSAGVAPAPAPGTDGKKKRGRPRKYGPDGKVAAGSAAGALSPMPISASIPLTGEFSAWKRGRGRPVESIKKSSYKYEFESPPPGPGDGIQYSVGANFTPHVLTVNAGEDVTMKIMSFQEGSRGICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPNENGITRSRSGGMSVSLAGPDGRVMGGGLAGLLIAAGPVQVVVGSFLPGHQLEHKAKKPRVEPISTIAPTHVNPVISSEEIRVNFGGVKPIMTPAAFQEENIVSFNNVQDSRNSSADDKGPLPEKESNPSLSNPEVAC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1624 338 Gene3D - 134 262 - -
Aev09g1624 338 CDD DUF296 133 246 IPR005175 -
Aev09g1624 338 MobiDBLite consensus disorder prediction 1 68 - -
Aev09g1624 338 MobiDBLite consensus disorder prediction 307 338 - -
Aev09g1624 338 ProSiteProfiles PPC domain profile profile. 129 270 IPR005175 -
Aev09g1624 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 17 326 - -
Aev09g1624 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 246 IPR005175 -
Aev09g1624 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 326 IPR039605 GO:0003680
Aev09g1624 338 SMART AT_hook_2 51 63 IPR017956 GO:0003677
Aev09g1624 338 SMART AT_hook_2 94 106 IPR017956 GO:0003677
Aev09g1624 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1624 Aev-Chr9 20134368 20138164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1624 40 261 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.232 1.33e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1624 - - gmx:100789179 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3021 05 30813474 30817113 Aev09g1624 09 20134368 20138164 PCT