Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1600 ATGCCTACCATGAAGAAGAGTTCTGAACAAATGTGTGTAGGACTTGTATTCAACAAGTTGGCGAAGGAGATTGGGGAACCTGTCGACTTTGAACTTCCAGATTGGTTTGATAAGTGGAAGCAAATGCAGTTTACCCCTATAAAACGCAATATATACCTGACGAAAAAGGTCAAAAAAAGGCTTGATGATGATGGCATATTTTGCTCTTGTGCTCCATCACCTGGATCTTCTACTGTATGCGGTAAAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGCTCTTCAGGCTGCAAATGTGATGGTACCTGTCTTAACAAACCATTCCAACATCGGCCCCGTAAAAAGATGAAAATGGTTAAGACCGAGAAATGTGGTTCTGGAATTGTTGCTGAAGAAGATATACAACAAGGGGAGTTTGTGATAGAATATGTTGGAGAAGTAATTGATGACAAAACATGTGAAGAAAGACTCTGGAACATGAAACATCGTGGGGAGACAAACTTCTACTTATGTGAAATTAATCGGGATATGGTGATTGATGCAACATATAAAGGAAATAAATCAAGATATATCAATCATAGCTGCTGTCCTAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATAAAGAAGGGCGAGCATCTGACTTATGATTATCAATTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCAAGTGGGTGTAGGCGGAAGCTTGGTGTCCGACCTACCAAGCCTAAAACGTTATCTGATGCCGCATTAAAATCATTTGGATGTCAGGTTTATCAAAATGGAGGTCTGCATATAGGAAGTTCTGTTGGCCAATCAAAGTGCTTACGCAATTGCATCGGGCAAGTTATTAGGATAAAACATCTCGATCAGGCGAGGTTTGGGATTATTAAACGGTTTGATGAGTATTCCAAAAAACACACAATCATGTTTGACGATGGATGCACTGAGCGTTATGACATGTCCAAGGAAGACTGGGAACTGGCACAATTGTGA 1044 0.4052 MPTMKKSSEQMCVGLVFNKLAKEIGEPVDFELPDWFDKWKQMQFTPIKRNIYLTKKVKKRLDDDGIFCSCAPSPGSSTVCGKDCHCGMLLSSCSSGCKCDGTCLNKPFQHRPRKKMKMVKTEKCGSGIVAEEDIQQGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYQFVQFGADQDCHCGASGCRRKLGVRPTKPKTLSDAALKSFGCQVYQNGGLHIGSSVGQSKCLRNCIGQVIRIKHLDQARFGIIKRFDEYSKKHTIMFDDGCTERYDMSKEDWELAQL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1600 347 Gene3D SET domain 34 269 IPR046341 -
Aev09g1600 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 274 - -
Aev09g1600 347 SUPERFAMILY SET domain 37 249 IPR046341 -
Aev09g1600 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 289 344 - -
Aev09g1600 347 ProSiteProfiles Post-SET domain profile. 237 253 IPR003616 -
Aev09g1600 347 PANTHER SET DOMAIN PROTEINS 12 274 - -
Aev09g1600 347 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0018024
Aev09g1600 347 Pfam SET domain 125 230 IPR001214 GO:0005515
Aev09g1600 347 SMART set_7 114 237 IPR001214 GO:0005515
Aev09g1600 347 SMART PostSET_3 237 253 IPR003616 -
Aev09g1600 347 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 44 289 IPR025787 -
Aev09g1600 347 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Aev09g1600 347 CDD SET_ASHR3-like 115 253 - -
Aev09g1600 347 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0018024
Aev09g1600 347 PANTHER SET DOMAIN PROTEINS 289 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1600 Aev-Chr9 19984164 19988718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1600 87 249 C2H2 Transcription Factor Family AT2G23740 35.519 1.24e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev09g1600 SET 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1600 - - gmx:100808183 602.823