Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1599 ATGGTCGTGAGCGGAGGGAAGACGTTGAAGCGCATGAAGAGGAGAGTCACTGCAGACTACTACGACTTCCACTCGTTTCCGTCGCCGTCCCTCGCCGCGTCGGAGGGATTTGCTGGATTTCCCTTCCGGTCGGCAGTCCGGTCCTTCCTGACCAAGCACGCGCTGCTCCCGCCGCCGTCTGCGCTCTTCCCGCACCTTCTGACGTGGCAGATCCTCTTTCGCGTCGGTGATATCGCCGCCGATGGTGGTGGCGGTGCGGAGTTAGGTCCAGCGGCGGTGTGCCTCGACGTGGTGGAGGAGGACGTGGCCAGATCTAGATCCGTGTACTGCGATCAGTGCCGAGTTTTCGGTTGGAGCGGTCACCCAGTGTGCGGAAAACGGTACCATTTTATTATCAAAGCTGATGGGAGCTCCATTGGTGGGTACCACAAGCCATGTATGTGCTGTGGAGATATCCTGCACTTGTCAGAGTCCAAGTGCAAGTCATGCAACCATGTGACTACCACTGATGATGTTGAAGACTGGGTGTACCACCAGTTAGAGAACACAACTCATCTATTACATGGTGTAGTACATGCTAATGGTTATGGGCATCTTCTTCGGGTTAATGGCAGAGAAGGGGGATCCAGATTTCTTTCTGGCTGCCATATTATGGATTTCTGGGATCGCCTATGCAAGACACTTGGAGTCAGAAAGGTTAGCGTGATGGATGTTTCAAAGAAATATGGGCTGGAATACCGCCTACTCCATACAATTGTCAAGGGCCACCCCTGGTATGGTGACTGGGGTTATCATTTTGGCTCTGGTAGCTATTGTCTCACACAAGAAGCATACAAGTCTGCTGTTGACAGCCTATCCAATCTACCCTTGTCCACCTACCTTTCCCAGGGACAAAATTCTTCCCACTCTCGTGTGCAGGGCATGATCTCATATTTCCAGTCTTTGTCTGATAACAAGCTTGTAAATGTAAGGGACCTCTTTTGTTTTGTGATGGGTTTGATTCATGATGCTCGCAAGACTGCATCCAAGGTTGATGACATGACCTGCAAGAAGCGCCGTTTTAATGCTTCTGGACCATCAAGTTCTTGGGAGAAGAGTGATATTGAACGTGTGGAAGCAGCCATGCTCAGAGTGTTGCGTGCAGTGTCTGGGTCCACTTGGGTGAGTTGGCGTGCTCTTAGGGGTGCTGTCTGCAAGGTGGGCCCTCCAGAGCTGCTTGATTATTGCCTTGGAGAACTGGGAGGAAAAGTGGTCTGTGGTGGAATGGTTGTTAATACCCGATGCAACCCTGAAACTGGTGCTTTTGAGTACAGACTCGAGGCTGCGAATGGTTCTTGCTATGAAATTATGGCGAACAATAATTCTTCAGGGTCGAAGTATCCATCCGAAGAGAATCTCCTACAATGCTTGAGATATTTATATGAGTCTTTGCTTCATCCTCAAATGATGGTAAACTATGTCACAGAAGGGACAAGGACTCTTGCAGTGAGCTCAGCTCAGAAACTTTTTGACTGCAAACAGTTTGTAAGAGATTATAGTCCTGAAAGGTTGCCAATATCAGATTTGCATAAAATACAAATCTCATGTCAGGTTGAGCTTGTAGACGAATCTGAAGATTCTGCAGCTAAAACCCCACCGGAACCAATTGTGCTGCCGACAAATGCCACGGTGTCTGACCTTAAGCTTGAAGCAGCAACTGCTTTCCAAGATGTATATTTGATGTTCAGAAGATTCCAAGTTGACGAGCTTGTTGGCTATAGCGGTGTAGAAGATTCCACCCATGTCAAGCTCTTGTTAGGATCAGAAGATGCAGTCCGTGTCCGAGGAAGATGCATCGGGAAGAGCGGGTTGAGCAAGTTCCGAATGGAAAGGGGGCTTGAGAGGTGGACTGTAGACTGCAAATGTGGTGCCAAGGACGATGACGGGGAGAGAATGTTGGCTTGCGACATATGCGGGGTGTGGCGGCACACCCGTTGCTGTGGCATTTGTGATACTGATCCTGTTCCGGCACGTTTTGTTTGCCCAAGATGCCAAAACTCTGACCCAAAACCTAAGCCTAATGGGCACTGCAAAGATGAGACCGTGACTAACGTTAGTTCTAGTGGTAGTTGCTTTGGAAATGGCTTGCCAGTGCCTTCTGATGTTCGTTAG 2151 0.4937 MVVSGGKTLKRMKRRVTADYYDFHSFPSPSLAASEGFAGFPFRSAVRSFLTKHALLPPPSALFPHLLTWQILFRVGDIAADGGGGAELGPAAVCLDVVEEDVARSRSVYCDQCRVFGWSGHPVCGKRYHFIIKADGSSIGGYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLENTTHLLHGVVHANGYGHLLRVNGREGGSRFLSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHTIVKGHPWYGDWGYHFGSGSYCLTQEAYKSAVDSLSNLPLSTYLSQGQNSSHSRVQGMISYFQSLSDNKLVNVRDLFCFVMGLIHDARKTASKVDDMTCKKRRFNASGPSSSWEKSDIERVEAAMLRVLRAVSGSTWVSWRALRGAVCKVGPPELLDYCLGELGGKVVCGGMVVNTRCNPETGAFEYRLEAANGSCYEIMANNNSSGSKYPSEENLLQCLRYLYESLLHPQMMVNYVTEGTRTLAVSSAQKLFDCKQFVRDYSPERLPISDLHKIQISCQVELVDESEDSAAKTPPEPIVLPTNATVSDLKLEAATAFQDVYLMFRRFQVDELVGYSGVEDSTHVKLLLGSEDAVRVRGRCIGKSGLSKFRMERGLERWTVDCKCGAKDDDGERMLACDICGVWRHTRCCGICDTDPVPARFVCPRCQNSDPKPKPNGHCKDETVTNVSSSGSCFGNGLPVPSDVR* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1599 716 MobiDBLite consensus disorder prediction 696 716 - -
Aev09g1599 716 Pfam PHD-finger 633 679 IPR019787 -
Aev09g1599 716 ProSitePatterns Uncharacterized protein family UPF0054 signature. 188 198 IPR020549 -
Aev09g1599 716 SMART PHD_3 632 678 IPR001965 -
Aev09g1599 716 SUPERFAMILY FYVE/PHD zinc finger 622 681 IPR011011 -
Aev09g1599 716 CDD PHD_MMD1_like 632 677 - -
Aev09g1599 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 617 683 IPR013083 -
Aev09g1599 716 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 685 - -
Aev09g1599 716 PANTHER OS01G0877500 PROTEIN 1 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1599 Aev-Chr9 19976338 19980928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1599 90 677 PHD Transcription Factor Family AT5G22260 30.622 4.05e-85 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev09g1599 PHD 5.5e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1599 - - gmx:100818189 1194.87