Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1597 ATGGAACACAAGAATAATTCTCAAGTTGATCAGAAGAAGGCAGAGAAAAAGGCAACAGTAAGATACAAGGAATGCCTCAAAAACCATGCAGCCTCACTTGGTGGCAATGCAACTGATGGGTGTGGTGAGTTCATGGCTTCAGGAGAAGATGACTCTCTTAAATGCTCTGCTTGCAATTGCCACAGAAACTTCCACAGAAAAGAGAATCTGGATTCTGAGCATTATGTTCTTTCAGTGATTCCTGAACCCCTTTTGGCTCATCTCTCTCCAAATCATAAGAGTGGTTCAATTAGTCCTTCTGATAATTCTGATGACCAGAATATTAAATGTGAAGAATATGGGAGTAGGAAGGTGAAGAAGAGGTTCAGAACAAAGTTCACACAAGAACAGAAGGAGAAAATGCTCTGTTTTGCAGAGAAAGCAGGGTGGAAGATTCAGAAGCTAGATGAGTCTATGGTGCAGAGGTTTTGTCAAGAGGTTGGGATCAAGAGAAGGGTACTCAAAGTTTGGATGCATAATAACAAGAACACTTTTGCCAACAAGAATAATCTCTCAAACTAG 561 0.4064 MEHKNNSQVDQKKAEKKATVRYKECLKNHAASLGGNATDGCGEFMASGEDDSLKCSACNCHRNFHRKENLDSEHYVLSVIPEPLLAHLSPNHKSGSISPSDNSDDQNIKCEEYGSRKVKKRFRTKFTQEQKEKMLCFAEKAGWKIQKLDESMVQRFCQEVGIKRRVLKVWMHNNKNTFANKNNLSN* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1597 186 SUPERFAMILY Homeodomain-like 113 177 IPR009057 -
Aev09g1597 186 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 119 176 IPR006455 -
Aev09g1597 186 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 68 IPR006456 -
Aev09g1597 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 7 181 - -
Aev09g1597 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 7 181 - -
Aev09g1597 186 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 21 68 IPR006456 -
Aev09g1597 186 Pfam ZF-HD protein dimerisation region 20 69 IPR006456 -
Aev09g1597 186 Gene3D - 103 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1597 Aev-Chr9 19962309 19962869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1597 6 186 ZF-HD Transcription Factor Family AT2G02540 48.182 2.96e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev09g1597 ZF-HD_dimer 2.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1597 - - gmx:100793926 232.261