Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1578 ATGGAGATAGAAGCAACAAGCAGTACAGCAACAATACCAGGTTTGAGTCCTCTGAGTGAGACCCTTTGGAGGGAAAAGGCAAAAACAGAAGAGATATTTGGGGATGTTTCAGCAAGATTGACATGGAAGGATCTAACGGTGATGGTAACTCTGCGGAATGGAGAGACACAGAATGTTCTAGAAGGACTGACAGGGTATGCAGAGCCAGGAACATTCACGGCTCTAATGGGGCCATCTGGTTCTGGAAAATCCACTCTGCTTGATGCTCTCTCTAGTCGCTTAGCTGCAAATGCATTCCTCTCAGGGACCATACTTCTCAATGGTAGAAAAGCCAAGCTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACACCTTGATCGGAACACTAACGGTACGAGAAACGATATCATATTCGGCACGGTTGAGGCTGCCGGACAAGATGTCGCGTTCGGACAAGCAAGCACTTGTGGAGAGCACGATAGTGGCAATGGGGCTTCAGGATTGTGCCGACACTGTGATTGGAAACTGGCACTTGCGTGGGATCAGTGGTGGTGAGAAGAGAAGAGTTAGCATTGCCTTGGAAATCTTGATGAGGCCTAGGTTGCTCTTCCTTGATGAACCTACCAGTGGTCTTGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTACGTGCTTTGGCAAGGGATGGTAGAACTGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTGTTCGAACTATTTGACCAATTGTGCTTACTTTCTGGGGGCAAGAATGTCTATTTTGGCCGGGCTTCAGAAGCATATGAGTTCTTTGCACAAGCTGGATTTCCATGCCCTGCCTTGAGGAACCCATCAGATCATTTCCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAATCTACTCTTAAAGGGTCCATGAAGCTAAGGTTTGAGGGAAGTGAAGATCCATTGGACAAGATCACCACTGCTGAAGCTATCAGATCTCTCACTGACTACTACAAATCTTCTCAGCACTTTTATGCTGCAATTCAGAGAGTGGATGAAATATCCAGAGTCAAGGGAACCGTGCTCGATGCCGGAGGAAGTCAGGCTAGTTTCTTGATGCAATCTTACACCTTAACGAAGCGCTCATTCACCAACATGTCAAGGGATTTTGGTTACTATTGGCTTAGGCTTGTGATCTATATTGTTGTCACAATCTGCATTGGAACCATTTATTTGAATGTGGGAACTGGCTATGATTCAATTCTGGCAAGAGGTTCATGTGCATCTTTTGTGTTTGGTTTTGTCACCTTTATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGAGAGAGGCAAAATGGCCACTATGGTGTCCTTTCATTTGTTATCAGCAACACGCTATCTGCGACGCCATTTCTGATATTGATCACCTTTCTATCTGGAACCATTTGTTACTTCATGGTTCGCCTGCATCCTGGATTTTGGCATTATATGTTCTTTGTTTTGTGCCTATATGCAAGTGTTACAGTGGTTGAAAGCTTGATGATGGCCATTGCTAGTATTGTCCCCAACTTCCTCATGGGTATCATAACAGGAGCTGGGATTCAGGGAATATTCATGTTAGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCATTTTGGCGCTATCCAATGTCATATATCAGTTTCCACTTCTGGGCACTACAGGGTCAATACCAGAACGACTTGAGGGGCTTGCTATTTGATAACAGCACACCAGACCTTCCCAAAATACCGGGTGAGTACATCTTGGAGAATGTATTCCAGATTGATGTGAACCGATCAAAGTGGGTAGATTTAGGCGTGATCTTAGGCATGATTGTCGCCTATCGTGTTATCTTCTTGGTCGTGATCAAGGTCAACGAGAATATTACACCTTGGGTTAGAGGCTACATGGCCAGGAGAAGAATGCAGCAGAAGAGTGCTATGCAGAACACAACAATTGCTCCTTATGCTCTTACTCAGTCCCCATCACTCAGAACCTATGTCACTACTCAAACAGCTGGTGATACTCGCAAGAGATAG 2088 0.4488 MEIEATSSTATIPGLSPLSETLWREKAKTEEIFGDVSARLTWKDLTVMVTLRNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDTLIGTLTVRETISYSARLRLPDKMSRSDKQALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLCLLSGGKNVYFGRASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKSTLKGSMKLRFEGSEDPLDKITTAEAIRSLTDYYKSSQHFYAAIQRVDEISRVKGTVLDAGGSQASFLMQSYTLTKRSFTNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYDSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERQNGHYGVLSFVISNTLSATPFLILITFLSGTICYFMVRLHPGFWHYMFFVLCLYASVTVVESLMMAIASIVPNFLMGIITGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLLFDNSTPDLPKIPGEYILENVFQIDVNRSKWVDLGVILGMIVAYRVIFLVVIKVNENITPWVRGYMARRRMQQKSAMQNTTIAPYALTQSPSLRTYVTTQTAGDTRKR* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1578 695 CDD ABCG_EPDR 37 265 - -
Aev09g1578 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 688 - -
Aev09g1578 695 SMART AAA_5 69 240 IPR003593 -
Aev09g1578 695 PANTHER OS04G0528300 PROTEIN 5 688 - -
Aev09g1578 695 Pfam ABC transporter 62 211 IPR003439 GO:0005524
Aev09g1578 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 283 IPR003439 GO:0005524
Aev09g1578 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 277 IPR027417 -
Aev09g1578 695 Gene3D - 33 278 IPR027417 -
Aev09g1578 695 Pfam ABC-2 type transporter 373 579 IPR013525 GO:0016020|GO:0140359
Aev09g1578 695 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1578 Aev-Chr9 19731953 19737632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1578 70 244 Calmodulin-binding Proteins AT2G36910 33.871 7.54e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1578 K05681 - gmx:100816389 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1578 09 19731953 19737632 Aev09g1578 09 19731953 19737632 ECH