Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1526 ATGAGCTCGAAGGAGAAGCCCACTCTAGGTGGCACGCGGATTAAGACCCGCAAACGGAACATTGCTGCACCATTGGACCCGGCATCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAGTCTTCAGAACTTGATTTCTCAAGATACGGTGACACATTTTTCGAGGTTGTTTTCATTGGGGGCCGTACACAACCTGGAACAACCAAGCTTGATGAGGGGGAGCACCATCCTTATTCTATAATAGAGTGTGAGCCAAAGCGTGAAGTTATTTTGCCGTCTGTACTATACCTACAAAAGATTTTACGGCGAAAACCATTTCTCATCAAGAACCTTGAAAATGTCATGCGAAGATTCCTTCAGTCCTTGGAGCTTTTTGAGGAAAATGAAAGGAAAAAGTTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGCTATCTGGTCTTCCACCAGAGACTGTGTTCCAGCCACTTCTTAAAGATAATCTTGTGGGCAAAGGGCTAGTCCTGTCATTTGTAACTGAGTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGATCTTATTTCAATTCTTAAACGGGGAAAAGTGGAGGACAATCTTTTGGATATTTTTCCCTCTGCAAAAAGATCAAATGAGGCTTTCTCTGACCATTTCACGAAGGAAGGACTATTAACCTTGGTAGAGTATAATGAGAAGAAAATATTTGAGGTGAAACTTAAGGGAATGAAGTCTGCTCTAAAAACACTGATAAAGGAGGAGGCTGATATATCCGAAGTCATAGAAACTGTGAAGCTGCAAGTTAAAGATGCTAAATTACCAGACATTGAGGTTGTGCGGGTCTTGTGGGACGTTTTAATGGATGCCGTTCAGTGGTCAGGAAAAAATCAGCAACAGAATTCAAATGCAGCCCTGCGCCAGGTGAAAATGTGGGCAGAGTTGCTGAATACATTCTGCACCAGCGGGAAACTCGAGCTTGAATTGATATACAAAGTACAGATGCAATGCTACGAGGATGCGAAACTCATGAAGCTGTTCCCTGAGATTATCAGGTCTCTTTATGAGCAGGATGTGCTGGCTGAAGACACCATTCTTCATTGGTTCCGAAAAGGAACAAACAACAAGGGCAGGCAAACCTTTGTTAAGGCGCTCGAACCCTTCGTCAATTGGCTGGAGGAAGCAGAAGAGGAGGAATGA 1236 0.4353 MSSKEKPTLGGTRIKTRKRNIAAPLDPASFSDAVVQIYLDNAGDLELVAKSIESSELDFSRYGDTFFEVVFIGGRTQPGTTKLDEGEHHPYSIIECEPKREVILPSVLYLQKILRRKPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSFVTEFFKEYLVDNSLDDLISILKRGKVEDNLLDIFPSAKRSNEAFSDHFTKEGLLTLVEYNEKKIFEVKLKGMKSALKTLIKEEADISEVIETVKLQVKDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNSNAALRQVKMWAELLNTFCTSGKLELELIYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRKGTNNKGRQTFVKALEPFVNWLEEAEEEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1526 411 CDD W2_eIF5C_like 216 404 IPR043510 -
Aev09g1526 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Aev09g1526 411 Gene3D - 244 411 - -
Aev09g1526 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Aev09g1526 411 SUPERFAMILY ARM repeat 258 408 IPR016024 -
Aev09g1526 411 SMART 542_3 325 410 IPR003307 GO:0005515
Aev09g1526 411 Coils Coil 121 141 - -
Aev09g1526 411 ProSiteProfiles W2 domain profile. 244 411 IPR003307 GO:0005515
Aev09g1526 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1526 Aev-Chr9 19223470 19228477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1526 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 30.909 1.03e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1526 - - rcu:8274281 743.036