Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1524 ATGGAGAATAATAACAATGGTGGAATCGTTCTGAAATCAAATGATCCTTCCAACAAAGGCTTTGATTTTCCCTCTGCCAAAAAGTGCATGGATTTCGATCTGAATATCCCCTTTGAGGAGACAAGTCCTGTTGATGAACCTTCTCAGGTGTTTTCTAACAATGTCCCCATAGAAGCCACACTTATGGGAGGCTTTGTGAATTCTCAGCCCCATCATGTTCAACTTCAAGCTCCAACAATGGCACTTGGAGGATTATATGCTCCAACAAGCCACCACCAAGTTCATGCATACAACAACATCAATGGCATTGTGCAATTGGCAAGTTCTGGTGCTGGTTCTAGAGTTGGAGGGATAATGATGCCAAGAAATGGCATGAACATCAGCACCAAAAGGAAGTTCGATTGGAATAGCATTCGTGAGGAAATGAATAATGCCTCATCTGAGAATAATGTCATTGACTTCACTTCTCCTCTTACTAATGAGAAACTAGCTAATGCTCTATTGAAGATTCAAGTGGTTGTACCTGCTCTTTCTTCAGCTGTTGCTACTGGTGGTCATTCTGCTGGAACCACTTCAAGAATCATCTTTTCACCTCAAGGAAATGCTGTTGAATCTGCACCAACTAGAAGGAGGGTGAATGGGGGCATGACTGAATATGGCAATAACAAGCGTTACAACAAGCAAAGATATGTGTTCAAATTTTTGAGCGACGTGGATGTAGTGGATGATGGTTTTAACTGGAGGAAATATGGCCAGAAGCATATCAAAACTCTTGGAAGCCCAAGGTGCTATTACAAGTGCACAGCTCCTGAATGCACGGTAAAGAAACTGGTGGAAAGGCATGCTGAAGACACTAGATATGTGATCACCACTTATGAGGGGAAACACAACCATCCAGTGCCTCTCTATAGAAAAAAGTACGGCAAGCATAATGACAATACCAACAACAACAATGGTCCTGATTCTACTAACAACAACAACAACAACGTTGTTGACAACAACAACATTGTTGTTGCTGCCACCGCACCACCACCCGCGGCGGTCACTACTAACAACAACACTTATGGCATTCCTGCTGGCCAAATCAACTTTGTTGGAGGAATCTTCAACAACAACAACACCAATAACATGAACATGAATGACATGATGATGATGACGAATCTTGCTTCTTCCTTCAATGCTGTTGCACCAAATATGAATGGTTACTACTACCACTACCCTTCCTTGAACATTGGTTCATATGACATGGCGAAGGTGGGATTTGATTTGAACCTTCTTCCGCCGCCGCCGCCACAGGATGAAAGTGGTTCAGAAGAAGAAGAGAATTCTAAGGACAATGCGTTTCTCTTACTTGGCTCAGTTCTTCGCTCCCCAAAACCTCCCTCTTCATTCATCTTCGCCCTCAGCAAAACCCAAACGCGAGAAGAAGAGGAAGAGAGTGTGATGCCAGGTGCAGCCATGTCTACGGAGCTAGAACCAGTTGAGCCACAGTCACTGAAGAAGCTAAGCTTCAAATCCCTAAAACGCGCCCTCGATCTCTTCTCCCCAACTCACTCTCAACTCGCTCCTCCTGACGCCGATAGCAAGAAGATACGCACTAGCCACAAGGTGAATGTGGAATATGGTGGAGTCAAAGCTACAAGTAATCAACCTGCTCGTCAAGCTAATTCTACCAAGCAGGATCAAAAACCAGGGCCCTCTAATGCTCTTGCTCTTCTGGGTCCAGGAGATTCCAAGGATCCCCAGAAAGGAGGACCCCAAAATGCATTGGTTGTTGGTCCAACTATGCCATCCACAGCTCCGAATGACCATGGTTTTCAAAGCAAAAGTAAAGCAGTTGTTTCTGCCTCTGGTTCATCTGAAAGGAATTTGTCAACAGCTGCTATAATGGAGAGAATGCCAAGTAAATGGCCACGTCCTGAATGGCATGCACCCTGGAAGAACTACAGAGTCATCAGTGGTCATTTAGGGTGGGTGAGATCTGTTGCTGTTGATCCCAGCAATACGTGGTTTTGTACTGGCTCAGCAGATCGAACTATCAAGATATGGGACTTGGCTAGTGGAAGGCTAAAGCTCACATTGACGGGTCACATTGAACAAATAAGAGGCCTTGCTGTCAGCAGCAAGCATACTTACATGTTCTCTGCTGGTGATGATAAGCAAGTTAAATGCTGGGATCTTGAACAGAATAAGGTTATTAGGTCGTATCATGGTCATTTGAGTGGTGTTTACTGCTTGGCTCTTCATCCTACAATTGACGTTTTACTGACGGGTGGACGTGATTCTGTCTGCCGAGTATGGGATATCCGTAGTAAAATGCAAATCCATGCCCTTTCAGGTCATGAAAACACTGTCTGCTCTGTATTTACACGGCCAACGGATCCCCAAGTTATTACTGGTTCTCACGACAGTACCATTAAGATGTGGGATCTTAGATATGGTAAGACAATGTTAACCCTTACAAACCATAAAAAATCTGTTCGCGCTATGGCTCCGCATCCTAAAGAGCAAGCTTTTGCATCTGCCTCGGCTGACAATATTAAGAAATTCAACCTTCCAAAAGGAGAGTTTATGCACAATATGCTCTCTCAACAGAAAACTATCATCAATACGATGGCTGTCAATGAGGAGGGTGTGATGGTTACTGGAGGTGACAACGGGAGTTTGTGGTTCTGGGATTGGAAGAGTGGTCACAATTTCCAGCAAGCCCAGACGATTGTACAACCTGGTTCACTGGACAGTGAAGCTGGTATTTATGCTTCAACCTATGACCTAACAGGATCAAGGCTTATAACCTGTGAAGCTGACAAGACTGTAAAAATGTGGAAAGAAGATGAAACTGCAACACCAGAAACCCATCCTCTTAATTTCAGACCCCCTAAAGACATTAGGAGATTTTAG 2901 0.4416 MENNNNGGIVLKSNDPSNKGFDFPSAKKCMDFDLNIPFEETSPVDEPSQVFSNNVPIEATLMGGFVNSQPHHVQLQAPTMALGGLYAPTSHHQVHAYNNINGIVQLASSGAGSRVGGIMMPRNGMNISTKRKFDWNSIREEMNNASSENNVIDFTSPLTNEKLANALLKIQVVVPALSSAVATGGHSAGTTSRIIFSPQGNAVESAPTRRRVNGGMTEYGNNKRYNKQRYVFKFLSDVDVVDDGFNWRKYGQKHIKTLGSPRCYYKCTAPECTVKKLVERHAEDTRYVITTYEGKHNHPVPLYRKKYGKHNDNTNNNNGPDSTNNNNNNVVDNNNIVVAATAPPPAAVTTNNNTYGIPAGQINFVGGIFNNNNTNNMNMNDMMMMTNLASSFNAVAPNMNGYYYHYPSLNIGSYDMAKVGFDLNLLPPPPPQDESGSEEEENSKDNAFLLLGSVLRSPKPPSSFIFALSKTQTREEEEESVMPGAAMSTELEPVEPQSLKKLSFKSLKRALDLFSPTHSQLAPPDADSKKIRTSHKVNVEYGGVKATSNQPARQANSTKQDQKPGPSNALALLGPGDSKDPQKGGPQNALVVGPTMPSTAPNDHGFQSKSKAVVSASGSSERNLSTAAIMERMPSKWPRPEWHAPWKNYRVISGHLGWVRSVAVDPSNTWFCTGSADRTIKIWDLASGRLKLTLTGHIEQIRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHENTVCSVFTRPTDPQVITGSHDSTIKMWDLRYGKTMLTLTNHKKSVRAMAPHPKEQAFASASADNIKKFNLPKGEFMHNMLSQQKTIINTMAVNEEGVMVTGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYASTYDLTGSRLITCEADKTVKMWKEDETATPETHPLNFRPPKDIRRF* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1524 966 PANTHER WD40 REPEAT PROTEINPRL1/PRL2-RELATED 493 966 IPR045241 GO:0000398
Aev09g1524 966 PANTHER BNAA01G27690D PROTEIN 493 966 - -
Aev09g1524 966 PRINTS G protein beta WD-40 repeat signature 797 811 IPR020472 -
Aev09g1524 966 PRINTS G protein beta WD-40 repeat signature 671 685 IPR020472 -
Aev09g1524 966 PRINTS G protein beta WD-40 repeat signature 755 769 IPR020472 -
Aev09g1524 966 MobiDBLite consensus disorder prediction 470 496 - -
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats profile. 736 777 IPR001680 GO:0005515
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 736 771 - -
Aev09g1524 966 MobiDBLite consensus disorder prediction 312 329 - -
Aev09g1524 966 MobiDBLite consensus disorder prediction 541 609 - -
Aev09g1524 966 Pfam WRKY DNA -binding domain 242 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 694 731 - -
Aev09g1524 966 MobiDBLite consensus disorder prediction 424 443 - -
Aev09g1524 966 ProSitePatterns Trp-Asp (WD) repeats signature. 755 769 IPR019775 -
Aev09g1524 966 MobiDBLite consensus disorder prediction 945 966 - -
Aev09g1524 966 Gene3D WRKY domain 226 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g1524 966 ProSiteProfiles WRKY domain profile. 236 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g1524 966 Pfam WD domain, G-beta repeat 690 726 IPR001680 GO:0005515
Aev09g1524 966 Pfam WD domain, G-beta repeat 647 684 IPR001680 GO:0005515
Aev09g1524 966 Pfam WD domain, G-beta repeat 731 768 IPR001680 GO:0005515
Aev09g1524 966 Pfam WD domain, G-beta repeat 775 810 IPR001680 GO:0005515
Aev09g1524 966 MobiDBLite consensus disorder prediction 543 565 - -
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 778 812 - -
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 652 689 - -
Aev09g1524 966 SMART WD40_4 645 684 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 687 726 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 771 810 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 729 768 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 905 943 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 854 893 IPR001680 GO:0005515
Aev09g1524 966 SMART WD40_4 813 851 IPR001680 GO:0005515
Aev09g1524 966 CDD WD40 648 943 - -
Aev09g1524 966 Gene3D - 631 966 IPR015943 GO:0005515
Aev09g1524 966 SUPERFAMILY WD40 repeat-like 642 943 IPR036322 GO:0005515
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats profile. 778 819 IPR001680 GO:0005515
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats profile. 694 735 IPR001680 GO:0005515
Aev09g1524 966 MobiDBLite consensus disorder prediction 299 329 - -
Aev09g1524 966 ProSitePatterns Trp-Asp (WD) repeats signature. 797 811 IPR019775 -
Aev09g1524 966 SMART WRKY_cls 241 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev09g1524 966 SUPERFAMILY WRKY DNA-binding domain 234 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev09g1524 966 ProSiteProfiles Trp-Asp (WD) repeats profile. 652 693 IPR001680 GO:0005515
Aev09g1524 966 MobiDBLite consensus disorder prediction 592 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1524 Aev-Chr9 19190994 19201890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1524 733 942 Miscellaneous Gene Families AT5G08390 30.093 2.99e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev09g1524 WRKY 6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1524 K12862 - gmx:100775526 892.878