Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1496 ATGCTTCTTCCCCTTCCTAACCCTTCCCAGCGCCGCCTGCACACCACCACACCCATCGACCCAGCAAATCGGCCAGCCCCTCCACCCATCGAACCCGCCCCTGTAACCACCGAACCCACCCCTGCACCCATCGAACCCGCTGCTGCAACCACCGACCAAACTCGCAACTCAACCGGTGTACCTTCCTCCGATCCTGCATCCACCGAATCTCCATCCTACTCCGACCCTGCACCCAACGAACCCACACCTTCCTCCGCCCAGCTCTCCGATCGAGCCACCTGTGCCTCTGACGAAGCACCTGGTGTCACCGATGGTCAAACCTCTGCCCTCGGTGACAGTGATGCTCGCTTACCCTCAGCCGCGGCTCCTTTTCCTGTACCCGACCTATCGCCCATCCTCGAACACTCCAACCCCTCAACAACCACTGAACCGCCGTCAACCACTACCTCCCTCCAGGCCCCGAATCCGACACATGCGGAACCCTCAAACCCAACAACCGCAACAGTTCCTGCTTCAGAGGATCCTCCATCTGCTCCCATCGAGCCTCTTGGTCGCGGGCACCAATCCAAAAGCAACCCAGTACGGCTGCGCGATTACATCACTCATGCCACGATACTAAAGAGTCCCTCTGTCCCCTCACCCTCTGCATCTGTGTCCTCTGGTAAGGCATTTCTTCACGAGGATCTTGCTGATGATGTCTACATGAAACTTCCTCTTGGGTTTCAAGTCTCCAAACCATGGCTCGTTTGTAAGCTCCGCAAATCATTGTATGGTCTTCGTCAGGCACCTAGATGCTGGTTTGCTAAATTATCTACAGCTCTTCTTCGGTATGAAGTGAAAGGTATTAGTGAAGAGGAAGTGGTTGTGGCGAAAAGAGCACGGTCAAGAAAAGGGTGCATGAAAGGGAAAGGTGGGCCAGAGAATGGTTTATGCACATACAGGGGAGTGAGGCAGAGGACTTGGGGAAAATGGGTTGCGGAAATTCGAGAGCCCAAACGCGGTGCTAGGCTTTGGCTTGGCACTTTCAACACTTCCATTCAAGCTGCTGTTGCGTATGATGATGCAGCCACAAGACTCTACGGTGCATCAGCAAAGCTCAATCTACCACCACCATCAGCACCTAATAATGATGATGTTGTCGGGAATATTAATAATGATGATCACAATTTGATCATTAATCCTAATCCTAGAGAGCATGCTTCTTCCAACGAGGTTTCAAGAGATAAAGGGGTGTTCTGGGAGAGTCATAGTAGCAGTGACTTCATTAGGAGTGATTTTCTGGAACTGAGCGATGCGCTGGGGCTGGGGATGGGGCTAGGGCAGGAGCTCAAGGATTGGGATCCATTACAAAGACCTGCGAGGAAGACAACCTTCGGATTTGTCAGATTCGGCAGTAAAGAGGAAGCACACAACGCGATCAAGGGATCGAATGGTTGGGAAGTAGATGGCACGAAGCTCACGTCTAAATGGGCGGAAGCCAAAGGACGGAAGTGGGAGAATGTTTGGAGGGTAAAGGAGATTCTAGAAGTTGAAGCAAATAAGACTGATCGTGAAAAAATGCAGGAATCTCAAAAGGAGGACATAGGATTGGAAGGAAATTCCAGTGCAAGAGACTCCGTCGACTTTATGGTTTCCAATGGAATGGTAAATGAGGATGTGGTCAACTGGTGCGGAAGGTGTGATGTTATCAAAATGAAAGACGTGATGGATAGGGAAAGTTTTGATGAAACTGTGAAGGGCGAGATAGATGGAATATGTAGTATACGAGCCCTTGATGCACGTTTCATGCTAGTGGAATTTGTAAACAAAGACGTCATGATGGAAGGGGTGAAACGTCTAAGAGAGATGACAATTATTAGCGAAGCCAATCCGTGGGAGGAAAGATCTTACTGTGAATTAAGAAGTGCAATAGTCAGATGTTTAGGGTTGCCCATTCATGGTTGGGCTAAGGAAAACTTCAGAACCTTAATGAAACCTTGGGGAACCTTTGTAAGATTCCGGATCGATGATGAATTCAAGTCTGTAAAACTCATCATTGAAACTACGAATCGTGAGGAAATCAAAGGATGGATCAACATTGAACTGGGAGAGAAGATCTATAAGATCCGAGTTGTGGAGGTTACAGACTCTGAGTGGGAAGGGTGTGATGATTCGAAAGAATCCGGGGAGAGGACGGTGAGCCCAAAATGCGCATCAGCTTCGAAGGCCATGCATTTTGAGACGCCAGACATAGCGAGCAAGACATCCAGCATTCCTGAAGGTGAAAAGTCTTCAAAAGATAAGGAGGAAGAGGAAGGGTCGGGTGAAAACCAGAGGGTGGAGAATATGCGACCCATGGAGGAAAGTAAGACAATGGGGAGGGAAGTGGACTTGGGCCCAAATACTATTGAGGAAGGGGAGGAAAGTGTAACCCAATGTTGGCCGTGCAGTACAACAACTTCTGAAGTAATTAAGCTGATGAAACAAAGTGAGAAAGGAAAGCGAGTAGAGTGTGGTCCCATTGATGAGAAAGAAGATTCAACTGATGATAGAAGGGGCCCACCGGGATTTGAATTCCAAAATGATCCAGCAGACCTAAACCTGTCAAAAGATCACTCAAAAAATCCAGATATGGCAGAGATCAGGGAAGCAGAAGAGGAAAAAGAAATTGAGAGAGCGGCGCTAGCGGCAATGGAAGCAGGCAAAGCTCTTGGATTCCTTGTGGATGAAGATGACAAGGAGCTTTCCAAAGCTCTAACCCGTATTAGAAGAAGGCAGAAGCAAAGAGCGGAAGCAGCGAAAAAGGCTCAGGCGATCCCGGTCCCTGAGAGCTGGAAGTCGAAGTTGAAAAGGCGAATCTAA 2841 0.49 MLLPLPNPSQRRLHTTTPIDPANRPAPPPIEPAPVTTEPTPAPIEPAAATTDQTRNSTGVPSSDPASTESPSYSDPAPNEPTPSSAQLSDRATCASDEAPGVTDGQTSALGDSDARLPSAAAPFPVPDLSPILEHSNPSTTTEPPSTTTSLQAPNPTHAEPSNPTTATVPASEDPPSAPIEPLGRGHQSKSNPVRLRDYITHATILKSPSVPSPSASVSSGKAFLHEDLADDVYMKLPLGFQVSKPWLVCKLRKSLYGLRQAPRCWFAKLSTALLRYEVKGISEEEVVVAKRARSRKGCMKGKGGPENGLCTYRGVRQRTWGKWVAEIREPKRGARLWLGTFNTSIQAAVAYDDAATRLYGASAKLNLPPPSAPNNDDVVGNINNDDHNLIINPNPREHASSNEVSRDKGVFWESHSSSDFIRSDFLELSDALGLGMGLGQELKDWDPLQRPARKTTFGFVRFGSKEEAHNAIKGSNGWEVDGTKLTSKWAEAKGRKWENVWRVKEILEVEANKTDREKMQESQKEDIGLEGNSSARDSVDFMVSNGMVNEDVVNWCGRCDVIKMKDVMDRESFDETVKGEIDGICSIRALDARFMLVEFVNKDVMMEGVKRLREMTIISEANPWEERSYCELRSAIVRCLGLPIHGWAKENFRTLMKPWGTFVRFRIDDEFKSVKLIIETTNREEIKGWINIELGEKIYKIRVVEVTDSEWEGCDDSKESGERTVSPKCASASKAMHFETPDIASKTSSIPEGEKSSKDKEEEEGSGENQRVENMRPMEESKTMGREVDLGPNTIEEGEESVTQCWPCSTTTSEVIKLMKQSEKGKRVECGPIDEKEDSTDDRRGPPGFEFQNDPADLNLSKDHSKNPDMAEIREAEEEKEIERAALAAMEAGKALGFLVDEDDKELSKALTRIRRRQKQRAEAAKKAQAIPVPESWKSKLKRRI* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1496 946 MobiDBLite consensus disorder prediction 820 868 - -
Aev09g1496 946 MobiDBLite consensus disorder prediction 47 92 - -
Aev09g1496 946 CDD AP2 311 369 IPR001471 GO:0003700|GO:0006355
Aev09g1496 946 MobiDBLite consensus disorder prediction 753 787 - -
Aev09g1496 946 MobiDBLite consensus disorder prediction 919 946 - -
Aev09g1496 946 MobiDBLite consensus disorder prediction 133 172 - -
Aev09g1496 946 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 222 291 IPR013103 -
Aev09g1496 946 SUPERFAMILY DNA-binding domain 312 369 IPR016177 GO:0003677
Aev09g1496 946 Coils Coil 874 894 - -
Aev09g1496 946 ProSiteProfiles AP2/ERF domain profile. 312 369 IPR001471 GO:0003700|GO:0006355
Aev09g1496 946 MobiDBLite consensus disorder prediction 820 849 - -
Aev09g1496 946 MobiDBLite consensus disorder prediction 1 193 - -
Aev09g1496 946 Pfam AP2 domain 312 361 IPR001471 GO:0003700|GO:0006355
Aev09g1496 946 SMART rav1_2 312 375 IPR001471 GO:0003700|GO:0006355
Aev09g1496 946 MobiDBLite consensus disorder prediction 713 788 - -
Aev09g1496 946 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 289 495 - -
Aev09g1496 946 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 289 495 - -
Aev09g1496 946 MobiDBLite consensus disorder prediction 21 41 - -
Aev09g1496 946 Gene3D AP2/ERF domain 312 370 IPR036955 GO:0003700|GO:0006355
Aev09g1496 946 SUPERFAMILY RNA-binding domain, RBD 456 502 IPR035979 GO:0003676
Aev09g1496 946 Gene3D - 432 497 IPR012677 -
Aev09g1496 946 PRINTS Ethylene responsive element binding protein signature 313 324 IPR001471 GO:0003700|GO:0006355
Aev09g1496 946 PRINTS Ethylene responsive element binding protein signature 335 351 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1496 Aev-Chr9 18947600 18955673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1496 282 371 AP2-EREBP Transcription Factor Family AT5G18450 72.826 2.26e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev09g1496 RVT_2 1.7e-13 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1496 - - vvi:100248518 158.688