Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1462 ATGGACGAAAAGATTGACACTGCTGACAAAAAGGTGCTGGTTGATATTGTAAAATTGGTACAAAAGAGAGCTATGAAGGGTGAATTGGGTGACTGGAAAGGGTTCTTGAATAGTCATGATAAAAAGTTTGGGGCGGGTTTGAGTGACCCAGCAAAGAGGTCCCATGAGGTTTTGGCTGAATTTTTAAAGACATTTTCAAAGGAAGATGATTTGAAGTTTATCGCCAACATCATGCGACATCATTCAAATCAAGGTTTAGTGAAGCAATTGAAAGATAATTCTCATGATTCCCCTCAGCAGAAGTTAGTCCAAGCAACTCTCCAGCACCCCCTATATCCATTTGATTATTCATTTCCATCAATTGATGAGGGATGGATGGTTGTAAACCTTACAAAGAAAGCAAAGAAATCTACTGATATGGTTGCTGTTGATTGTGAGATGGTTCTCTGTGAAGACGGGACTGAAGCATTAGTGAAAGTATGCGTAGTAGATCACAATTTAGAGGTCAAACTAAATAAACTTGTGAAACCCAACAAAACGATTGTAGACTACAGGACAGAGATTACTGGTGTGTCTCCCCAAGATCTAGAGGCAGTCACCTGCACCTTGTCTGATATACAGAAATCTATGAAGAAGTTGCTATGCAATGGAGCCATATTAGTGGGACACAGTTTGCATAATGATCTACGTGCGCTGAAGCTACATCATGTTAGAGTGGTTGACACTGCATATATATTCCAATTCTCAGATGGATCACTTCAAAAGAGACCTTCTTTAAATAATTTATGCAAGGCTGTGTTAGGCTATAAAGTTCGGGAAGAGGGAGCTCCACATATTTGTCTAGATGATGCATGTGCAGCAATGAAACTTGCTCTTGCAAAGATCAATAACGGTGTTGATAAAGCATTTCCATTGGTTCAAGAGCCTGTTTCTGAAAGTGAGATGGCGAAGCTGCTTCTTCACAAGATACCATCCGCTGTTAAGATTGAAACACTACATAAAGTTGTTCCTGGGGACTTCACAATAGAACTGAAGCCTTCCAGGAAAGGACAGGGAGAAAAATATGCTGCCCTAGCTATCTTTAAGAACCGACAAGAGGCACATGATGCCTATGAAAATGTCGAAGGCATCCAATCAAAGGATTCAAATGGCATTCCACAGAAGCTTGTCAAATTTCAGCTCAGTACAGGCATAAGTGCCGAATTATTTGTTCGGAAAATGACAGCAAATGAGTGCAGTGATCCGAATCCATCGAAGCGAGGCTTACAAAGATATGAGGAAGATCATGTTTCCAAGAAAGCAAAGATGGATATAGAATACGGCCTGGGAGTCTCAAGTAAGTCTGACAACCAGTTGAAAGAGATCAAAGCACTGAATGAAAGATTGAAGCAAAGCGAGTCTGAAATCGAATCTCTGAGAGAAGAACTAACACAAAAGGATGTTGAAATTGATTCTATGAGAGAACAGTTGAAACAAAAGGATTTTGACATCTCCATGCTGAATAAAATGATAGCCTCCTTGAAAAAGCGAAAAAACTAA 1539 0.399 MDEKIDTADKKVLVDIVKLVQKRAMKGELGDWKGFLNSHDKKFGAGLSDPAKRSHEVLAEFLKTFSKEDDLKFIANIMRHHSNQGLVKQLKDNSHDSPQQKLVQATLQHPLYPFDYSFPSIDEGWMVVNLTKKAKKSTDMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNKLVKPNKTIVDYRTEITGVSPQDLEAVTCTLSDIQKSMKKLLCNGAILVGHSLHNDLRALKLHHVRVVDTAYIFQFSDGSLQKRPSLNNLCKAVLGYKVREEGAPHICLDDACAAMKLALAKINNGVDKAFPLVQEPVSESEMAKLLLHKIPSAVKIETLHKVVPGDFTIELKPSRKGQGEKYAALAIFKNRQEAHDAYENVEGIQSKDSNGIPQKLVKFQLSTGISAELFVRKMTANECSDPNPSKRGLQRYEEDHVSKKAKMDIEYGLGVSSKSDNQLKEIKALNERLKQSESEIESLREELTQKDVEIDSMREQLKQKDFDISMLNKMIASLKKRKN* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1462 512 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 432 - -
Aev09g1462 512 Gene3D - 135 306 IPR036397 GO:0003676
Aev09g1462 512 CDD REX1_like 141 292 IPR034922 -
Aev09g1462 512 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 432 - -
Aev09g1462 512 Coils Coil 448 489 - -
Aev09g1462 512 SUPERFAMILY Ribonuclease H-like 140 297 IPR012337 -
Aev09g1462 512 SMART exoiiiendus 139 300 IPR013520 -
Aev09g1462 512 Pfam Exonuclease 141 290 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1462 Aev-Chr9 18624548 18629557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1462 134 271 C2H2 Transcription Factor Family AT3G27970 32.692 3.06e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1462 K14570 - gmx:100785565 686.411