Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1443 ATGTTTTCTGGTGATATTGAGAACAAACACTTCTTGCAAGCTAAAAACCTCCCCCTTCTTCCATTTTCAGGCTGTGAAAATCGAAAGATGGAGGGAAAACCTGAGGATGAGGTGGTAGATATTGAGAGTGCTTCTAGTGGTTCTTTCAATGACAATTCAGATGAAGAGGGATCTTTGCCTCCTGAAATAGATGATGGAGTGCATCTTGAGGAACCTATGACTGAGGAGGAAATACAAGATCTTATTAATGATTTGTTAGTAGTGGAGAGTCAGGCTGCAGAGGCTCAAGAAGCTCTTGAAGAGGAATCTCTTGCCAAAGTGGAGAGTGAAGTTAGACAAGAATTGCAGCAAACTCTTGAGGGGGATGAATTGGAAACTGCTGTTGCCAATGAGATGGATGCTTTGAAAGAACAGTGGGAAGCTCATCTAGATGGCCTTGAAACTGAAAGTGCCAACTTACTGGAACAACTTGATGGTGCTGGAATTGAGCTCCCAAGCCTTTATAAGTGGATTGAAAGAGAAGCTCCCAATGGTTGCCATACTGAAGCATGGAAAAAGAGGAATCATTGGGTAGGCTCTCAGGCAACTGCTGAAAGTGCTGAGTCAATTGCTGGTGCTGAGAAGTATCTACAAGTAGAAAGACCTATTAGACGGCGACATGGTAAGTTACTTGAAGAGGGAGCTAGTGGCTTTCTCCAAAAAAAACTTGGTAATGAAACCGAGGAGCCTGTAAAGAAAGAGATTGAGGGAGATTGGAATTTATTCAATAAAATAGTTTCCAATGAGAGTGGGGCTGATGTTTCATTTGGCAGTAAGCATTGGGCTTCTGTTTATTTGGCCAGCACTCCACAGCAAGCTGCAATGATGGGACTCAAATTTCCTGGAGTTGATGAGGTGGAGGAGATTGATGATATTGATGGAAATTCTACCGATCCATTTGTTGCAGCTGCAATTGCACATGAAAAAGAACTAGATCTTTCTGAAGAGCAAAGGACACAATTTAAGAAGGTCAAAGAAGAGGATGATGCTAATGTTGATAGGAAGCTTCAAATCCACTTGAAACACAGGAGGCGTCAAAAGAAAAGTAAACAGGAAGGAACTTGTCTGAATACGAAGACCGATGAAATTGATGGTCTTGATGATAGTTACCATCATGATAAAGAAAAGCCTTTGAGTTCTAACGATATTTCAGATCCCCCCAAATCTCCATTGGATGATATCACTGAACAGAGAGGAATGAAGCGTCCAAATGATGGTGAGCTTGAAGCTGATAATAAAAAGTGCCGTACCATTATTATTGATAGCAATGGTGGCGCTGATGCTGCTGAAGATAAGCTAGATAGCAACATGAATACCCTAGAGGATCAATCTGAGGTTAAAGACTTACGTAAGACTGGTGCTGATTCTCTTGATTCTGAGTGTATGGATGAGAAATTTCATTGCACAATTTGTTATCAAGTGGCTCTTGAAGTTCACCCACACCCTCTGTTGAAGGTGATTATTTGTGAGGATTGCAACACTTTAAGGGAGGAAAAGATACATGCAAAGAACCTGGGTCTTGATTGTCCCCCATGTTACTGTGCATGGTGTGGAGGAAGCAGTGGATTAGTTAATTGTAAATTATGTACAATGCTCTTCTGCACCAGCTGTATCAAGAAGAATCTTGGTGTTGAATTCCTTACTGAAGCTCAGGCCACCAGTTGGGATTGTTGCTGTTGCCGTCCAAATCTTTTGCAACGACTGACATTGCAACTAGAGAAAGCTATGGGATCTGCTGATTTACTAGTTTCCAGTTCTAGTAGTGATTCAGATGACTCGGATGACTCAGATGATTCACATGCAAACATTAATGTTACAATCAGCTCTAAGAGAAGGCGCAAAAAGAAGATTAGGAGGATACTTGATGATGCGGAATTAGGAGAAGAGACAAAAAAGAAAATAGCAATTGAAAAGGAACGTCAGGAACGCCTGAAGTCTTTGCGTGTGGAGTGTTCTGCCTCATCAAATGAGATGAGCTCTGCTGGCTGTATTGGGAATTTACCTGAAGGTGCAAGCGTTGAAGTTCTAGGTGATGCGCAAGCTGGTTACATAGTGAATGTTGTGAGGGAGAAAGGTGAAGAAGCTGTCAGAATTCCTCCCAGTATCTCTGCTAAACTGAAGGCACATCAGATTGCAGGAATAAGATTTATGTGGGAAAATATAATACAGTCAATAAGAAAAGTGAAGTCTGGGGATAAAGGTCTTGGCTGTATTCTAGCTCATACTATGGGGCTTGGTAAAACTTTTCAGGTGATAGCTTTCTTGTACACTGCAATGAGGAGTGTTGATTTGGGGTTAAGAACTGCACTTATAGTCACACCTGTCAATGTGCTGCATAATTGGCGACAGGAGTTTCTCAAGTGGAAGCCATCAGAGTTAAAACCCCTCAAGGTCTTCATGCTGGAAGATGTATCAAGGGAGAGGAGGGCAGAATTGCTTGCAAAGTGGAGAATTAAAGGCGGTGTCTTTTTGATTGGCTATACTGCTTTCCGCAATTTGTCTTTTGGGAAGCATGTGAAAGATCGTCACATGGCCCGAGAAATTTGCCATGCTTTGCAGGACGGACCAGACATTCTTGTTTGTGATGAAGCCCATATGATAAAAAATACAAAGGCTGACGTAACTCAAGCTTTGAAACAAGTAAAATGCCAAAGACGAATTGCACTAACTGGATCACCTCTTCAAAACAATCTCATGGAGTATTATTGTATGGTTGATTTTGTAAGGGAAGGATTTCTTGGAAGCAGCCATGAATTTAGAAACCGCTTCCAGAATCCTATAGAGAATGGTCAACACACTAATTCAACTCTCACTGATGTGAAAATTATGAATCAAAGGTCTCATATCCTCTATGAACAGTTAAAAGGCTTTGTCCAAAGAATGGACATGACTGTGGTGAAGAAGGATCTACCTCCTAAAACTGTGTTTGTGATAACTGTCAAGCTTTCCCTGTTACAGAGGAAATTGTACAAGAGATTCCTCGAAGTGCATGGGTTCACTAATGACAGGGCACATGAAAAGTTACGAAAGAGAAGTTTTTTTGCTGGTTACCAGGCATTAGCTCGGATATGGAACCACCCAGGGATCTTGCAATTGACAAAAGAAGAAAAGGATTATGTTAGACATGAAGAAGCTGTTGAGAACTTTCTCGTGGATGATTGCTCCAGTGATGAAAACTCTGATAATAATGCTGCTGGAGAAAAGATGAGGTATGCAAATGATTTGCAGCAAAGGAAAGATGATAAAGGCTTTTTCGTAAAGGGATGGTGGAATGACCTGCTTCATGGAAAGATATATAAAGAGCCTGATCACGGTGGTAAAATGGTTTTGCTGCTGGAGATACTAACCATGAGTTCTGCAGTGGGTGATAAGGTGTTAGTTTTTAGTCAGAGCATACCAACCCTAGACCTCATAGAATTTCATCTATCGAGAATACCCCAGCGTGGTAGACAAGGGAAGTTTTGGAAGAAAGGAAAAGATTGGTATAGGCTGGATGGAAGGACAGAGAGCTCTGAACGGCAGAAGATTGTTGAGAGATTTAATGAGCCCTTGAATAGAAGGGTAAAATGCACTCTGATTTCAACCAGGGCAGGATCTTTGGGTATTAATCTTCATGCTGCTAACCGTGTTGTTATAATTGATGGTTCTTGGAATCCAACATATGATCTCCAGGCCATTTATCGAGCTTGGAGGTATGGGCAGACAAAGCCTGTGTTTGCATACCGATTGCTGGCTCATGGTACCATGGAAGAAAAAATATATAAGCGACAGGTAACAAAGGAGGGCCTTGCTGCTAGAGTGGTTGATAGGCAACAAGTACATAGGACGATATCTAAAGAAGAAATGTTACATCTGTTCGAGTTTGGTGATGATGAGAACCCTGATACTTTGGATGTACTTAATCAAGAAAATGGGGATGGTTGTGATCAAAATGACCCAAATTTGGTTAGGCATTCACTGAAACATGCAGCACCGCATTCAAATGGAAGCAGTAATTCTGATAAGTTAATGGAAAGCTTACTTACGAAGCATCATCCACGGTGGATTGCTAATTATCATGAACATGAATCGCTGTTACAAGAAAATGAAGAGGAAAAGCTATCAAAAGAGGAGAAAGACATGGCTTGGGAAGTGTACCGAAAATCACTTGAATGGGAAGAAATTCAGAGAGTACCAGTTGAGCCTATGCAACAACCTGATCAAAAGGCAGGAATACCAAATGCAAAACCAAAGGCACCATCACCATCAATACCAGAAAACCCTCTCAGCATGATAACAAGTAGTAGGATAAGGAACCGTTTCACCATGAGGAAATGCACTAACCTTGCACACATGCTGACCCTTAGAAGTCAGGCCATAAAACATGGTTGCAGTACAGTTTGTGGGGAATGTGCCCAGGAGATTAGTTGGAATGACTTAAAGGTTAGCAAATAG 4473 0.414 MFSGDIENKHFLQAKNLPLLPFSGCENRKMEGKPEDEVVDIESASSGSFNDNSDEEGSLPPEIDDGVHLEEPMTEEEIQDLINDLLVVESQAAEAQEALEEESLAKVESEVRQELQQTLEGDELETAVANEMDALKEQWEAHLDGLETESANLLEQLDGAGIELPSLYKWIEREAPNGCHTEAWKKRNHWVGSQATAESAESIAGAEKYLQVERPIRRRHGKLLEEGASGFLQKKLGNETEEPVKKEIEGDWNLFNKIVSNESGADVSFGSKHWASVYLASTPQQAAMMGLKFPGVDEVEEIDDIDGNSTDPFVAAAIAHEKELDLSEEQRTQFKKVKEEDDANVDRKLQIHLKHRRRQKKSKQEGTCLNTKTDEIDGLDDSYHHDKEKPLSSNDISDPPKSPLDDITEQRGMKRPNDGELEADNKKCRTIIIDSNGGADAAEDKLDSNMNTLEDQSEVKDLRKTGADSLDSECMDEKFHCTICYQVALEVHPHPLLKVIICEDCNTLREEKIHAKNLGLDCPPCYCAWCGGSSGLVNCKLCTMLFCTSCIKKNLGVEFLTEAQATSWDCCCCRPNLLQRLTLQLEKAMGSADLLVSSSSSDSDDSDDSDDSHANINVTISSKRRRKKKIRRILDDAELGEETKKKIAIEKERQERLKSLRVECSASSNEMSSAGCIGNLPEGASVEVLGDAQAGYIVNVVREKGEEAVRIPPSISAKLKAHQIAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRQEFLKWKPSELKPLKVFMLEDVSRERRAELLAKWRIKGGVFLIGYTAFRNLSFGKHVKDRHMAREICHALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLTDVKIMNQRSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVITVKLSLLQRKLYKRFLEVHGFTNDRAHEKLRKRSFFAGYQALARIWNHPGILQLTKEEKDYVRHEEAVENFLVDDCSSDENSDNNAAGEKMRYANDLQQRKDDKGFFVKGWWNDLLHGKIYKEPDHGGKMVLLLEILTMSSAVGDKVLVFSQSIPTLDLIEFHLSRIPQRGRQGKFWKKGKDWYRLDGRTESSERQKIVERFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIIDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDTLDVLNQENGDGCDQNDPNLVRHSLKHAAPHSNGSSNSDKLMESLLTKHHPRWIANYHEHESLLQENEEEKLSKEEKDMAWEVYRKSLEWEEIQRVPVEPMQQPDQKAGIPNAKPKAPSPSIPENPLSMITSSRIRNRFTMRKCTNLAHMLTLRSQAIKHGCSTVCGECAQEISWNDLKVSK* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1443 1490 Coils Coil 129 156 - -
Aev09g1443 1490 PANTHER RAD54-LIKE 58 1486 IPR044574 GO:0016887
Aev09g1443 1490 Pfam SNF2-related domain 741 1042 IPR000330 GO:0005524|GO:0140658
Aev09g1443 1490 Gene3D - 690 973 IPR038718 -
Aev09g1443 1490 Coils Coil 1365 1385 - -
Aev09g1443 1490 CDD SF2_C_SNF 1116 1257 - -
Aev09g1443 1490 MobiDBLite consensus disorder prediction 402 421 - -
Aev09g1443 1490 SMART ultradead3 715 936 IPR014001 -
Aev09g1443 1490 CDD ADDz_ATRX 477 575 - -
Aev09g1443 1490 MobiDBLite consensus disorder prediction 348 421 - -
Aev09g1443 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 705 973 IPR027417 -
Aev09g1443 1490 MobiDBLite consensus disorder prediction 21 66 - -
Aev09g1443 1490 Pfam Helicase conserved C-terminal domain 1121 1246 IPR001650 -
Aev09g1443 1490 MobiDBLite consensus disorder prediction 1409 1435 - -
Aev09g1443 1490 MobiDBLite consensus disorder prediction 363 394 - -
Aev09g1443 1490 SMART helicmild6 1156 1246 IPR001650 -
Aev09g1443 1490 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 741 924 IPR014001 -
Aev09g1443 1490 Coils Coil 78 98 - -
Aev09g1443 1490 ProSiteProfiles ADD domain profile. 469 601 IPR025766 -
Aev09g1443 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 979 1315 IPR027417 -
Aev09g1443 1490 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1126 1294 IPR001650 -
Aev09g1443 1490 PANTHER RAD54-LIKE 58 1486 - -
Aev09g1443 1490 Gene3D - 984 1325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1443 Aev-Chr9 18459217 18484335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1443 1110 1299 RAD5 or RAD16-like Gene Family AT5G43530 33.158 8.88e-21 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev09g1443 SNF2_N 4.7e-52 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1443 K10779 - gmx:100794911 2237.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1443 09 18459217 18484335 Aev09g1443 09 18459217 18484335 ECH