Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1435 ATGTCGACCGTCGCAGCAACGCAAGCCAAAACCAAGAAAACGGTGTCGTCTAAGAAGTCACCCTCTCACCCTCCTTTCTTCGAGATGATTACCGAAGCGATTGTGAGTTTGAAAGAGAGAACTGGTTCGAGCCAGTACGCGATTACGAAGTTCATCGAGGAGAAGCACAAGGCTCTTCCACCAACGTTCAGGAAGCTTCTCCTCCATAACTTGAAGAAATCCGTTGCTGCTGGAAAACTCGTGAAGGTGAAGAACTCGTTCAAGCTTGCACCCAAAGTTTCTGCACCTGCTAAGCCTAAAGCTGCGGCCAAGCCTGCGGCGTCCAAACCTAAGGTCAAAGCTGCTTCTGCTGCTGCTCCCAAGAAGAAGCCTGCCTCCAAACCTAAGGCCAAGGCTGTTGGTTCGGGATCTGCGAAGCCAAAGGCCAAGGCGGTGGCTGCGAAGAAGGTTGTGGCGAAGTCGGTGAAGAAGGCGGTGGTGAAGAAGACTCCGGTGAAGAAGCCGAAGAGCGTGAAGTCGCCGGCGAAGAAAGCAGCGGTGAAGAAGACAAAGAAGTGA 558 0.5269 MSTVAATQAKTKKTVSSKKSPSHPPFFEMITEAIVSLKERTGSSQYAITKFIEEKHKALPPTFRKLLLHNLKKSVAAGKLVKVKNSFKLAPKVSAPAKPKAAAKPAASKPKVKAASAAAPKKKPASKPKAKAVGSGSAKPKAKAVAAKKVVAKSVKKAVVKKTPVKKPKSVKSPAKKAAVKKTKK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1435 185 PRINTS Histone H5 signature 141 158 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev09g1435 185 PRINTS Histone H5 signature 9 30 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev09g1435 185 PRINTS Histone H5 signature 36 53 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev09g1435 185 PRINTS Histone H5 signature 109 123 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev09g1435 185 PRINTS Histone H5 signature 163 182 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev09g1435 185 MobiDBLite consensus disorder prediction 91 185 - -
Aev09g1435 185 PANTHER HISTONE H1 5 182 - -
Aev09g1435 185 SUPERFAMILY "Winged helix" DNA-binding domain 19 102 IPR036390 -
Aev09g1435 185 PANTHER LINKER HISTONE H1 AND H5 FAMILY PROTEIN 5 182 - -
Aev09g1435 185 CDD H15 23 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g1435 185 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 22 91 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g1435 185 MobiDBLite consensus disorder prediction 154 185 - -
Aev09g1435 185 MobiDBLite consensus disorder prediction 1 21 - -
Aev09g1435 185 MobiDBLite consensus disorder prediction 1 22 - -
Aev09g1435 185 SMART h15plus2 20 86 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g1435 185 Pfam linker histone H1 and H5 family 23 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev09g1435 185 Gene3D - 17 102 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1435 Aev-Chr9 18365570 18366247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1435 29 89 Single Myb Histone (SMH) Gene Family AT1G49950 42.623 1.75e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1435 K11275 - mnt:21407299 119.398