Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1403 ATGTTTGATGGAGTACCAGAGCAGTTCCACCAATTCATAAGAAGCAACTCACAATCATCACTTCCTCTTCATCACTTACCCTTCCCTAACAACACCCCTTTTCTTGATCCTTCTCTTCATCATCATCAATTCCACCAACTAGTTCAACACAATAATCTCTTGCACCCATTACACTCTTCTTCTTCTTCTTCCAAGCATGAAGAGAAGCAAGAGAATAATACCAATAATACCACTTTGCCATTGAGCTTTGAAATTATTGATGAAGAGAGAGATCATGACCATCAAAAGCAACAGTTGCCTGAGCTGATTGATCCATGGAGTAATGAAGAAGTTCTCACCCTTTTGAGGATCAGATCTAGCATGGACAGTTGGTTCCCAGAACGCACTTGGGAACATATCTCAAGGAAAATGGCAGAGGTTGGGTATAAGAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAGAGCAGATTCTTCACCAACAACATCAATAATAATAACAACAACAACTATGGAAAAAGTAGTAGTAGTACTAGTTACCGGTTTCTTAGTGAACTTGAGGAGCTTTATCACCATCAAGAGGTTGTTGTTGAGAGTGATCAGAAGAATCATCATCAAAATAATAATAATCATGCAAGTGATGAGGGAAAAAAACAACAAGAGGAGGAGGTGAAGATCATGGATCATCATGCATTGGGAGGAGAAGAAGAAGGTGATTTAGGAAAGGTGAATACCACCTCGCCGCCAACGACGAAAGAGGAGAGGAGCAATAATAATAAGAGGAAGAGGGGTGGTGGTGGGAGGTTTGAGATGTTCAAGGGGTATTGTGAGAGCATTGTGCACAAGATGATGGAGCAACAAGAGGAGATGCACAACAAGCTCATTGAGGACATGGTGAGGTGGGATGAGGAGAAGTTTGCAAGGGAAGAAGCTTGGAAGAGGCAAGAGATTGAGAGGATGAACAAGGAGCTTGACATTATGGCTCAAGAACAGGCCATTGCAGGCGACCGCCACGCTAGCATCGTTGATTTCTTGACGAAATTTGCCCCTCAGATTCAAGATCTTGGCCTAATTGGTGGAAGAGACAAGTTAGTTAAGGTAACAACAAATAATGTTAATGGTTCAAACACTGAATTGCACTCTCATCAAAACCCTAATCCCTCTTCAATGGAAAATAGTCTTCAGCCAACAAATTCAATTTCAGTGGCAAAAGAAAACCCTAGCTCAAGTGGTACTCATCATGCACAAGACACATTGTTACAAGTTGGCATCATGAACCCTAGTTCTTCTTCTTCCCTAGTCAACAATGATCCAATAGAGACAAATTCTTCAGTTGCAAATAAGGCCACAACAACTGAGAAAGACGACATTGGGAGAAGATGGCCAAAAGATGAAGTGTTGGCATTGATAAACTTGAGGTGCACAACCCAAAACAACAACAACAACAATGAAGACAATAGTAATAAGGAAGGGAACAATAATAATAATAAGGCTCCTCTATGGGAGAGAATCTCACAAGGTATGATGGAGTTGGGGTACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAAACAAAAGATGTTAACAAAAAGAGGTCACTTGATTCAAGGACTTGTCCTTATTTTCACTATCTCACTAATCTTTATAGTCAAGGGAAACTTGTTCTACAGCCACCTGAGCGGTCGCAGAAAATCATACCAGCACAAATGCACCAGATCCCATCTGTGGTGATAGACAATAATCAGAATCAAACACAATTAGTTGATGAGACTACTTCTTCTCAGGTGGGGTCTGGTGGTGAAGGGCTCAGTGTGCAGAAGGTTGATCATGGAGGTGAGAAAACTTTGATGCAAGTACCTTCTCTGGATTTTGATCAGTTCTAA 1914 0.4122 MFDGVPEQFHQFIRSNSQSSLPLHHLPFPNNTPFLDPSLHHHQFHQLVQHNNLLHPLHSSSSSSKHEEKQENNTNNTTLPLSFEIIDEERDHDHQKQQLPELIDPWSNEEVLTLLRIRSSMDSWFPERTWEHISRKMAEVGYKRSAEKCKEKFEEESRFFTNNINNNNNNNYGKSSSSTSYRFLSELEELYHHQEVVVESDQKNHHQNNNNHASDEGKKQQEEEVKIMDHHALGGEEEGDLGKVNTTSPPTTKEERSNNNKRKRGGGGRFEMFKGYCESIVHKMMEQQEEMHNKLIEDMVRWDEEKFAREEAWKRQEIERMNKELDIMAQEQAIAGDRHASIVDFLTKFAPQIQDLGLIGGRDKLVKVTTNNVNGSNTELHSHQNPNPSSMENSLQPTNSISVAKENPSSSGTHHAQDTLLQVGIMNPSSSSSLVNNDPIETNSSVANKATTTEKDDIGRRWPKDEVLALINLRCTTQNNNNNNEDNSNKEGNNNNNKAPLWERISQGMMELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHYLTNLYSQGKLVLQPPERSQKIIPAQMHQIPSVVIDNNQNQTQLVDETTSSQVGSGGEGLSVQKVDHGGEKTLMQVPSLDFDQF* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1403 637 ProSiteProfiles Myb-like domain profile. 461 529 IPR001005 -
Aev09g1403 637 MobiDBLite consensus disorder prediction 433 456 - -
Aev09g1403 637 CDD GT1 460 536 - -
Aev09g1403 637 Gene3D - 462 534 - -
Aev09g1403 637 Gene3D - 106 161 - -
Aev09g1403 637 MobiDBLite consensus disorder prediction 201 268 - -
Aev09g1403 637 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Aev09g1403 637 SMART sant 102 159 IPR001005 -
Aev09g1403 637 SMART sant 458 531 IPR001005 -
Aev09g1403 637 MobiDBLite consensus disorder prediction 477 498 - -
Aev09g1403 637 Pfam Myb/SANT-like DNA-binding domain 460 556 IPR044822 -
Aev09g1403 637 Pfam Myb/SANT-like DNA-binding domain 104 186 IPR044822 -
Aev09g1403 637 MobiDBLite consensus disorder prediction 55 79 - -
Aev09g1403 637 MobiDBLite consensus disorder prediction 201 238 - -
Aev09g1403 637 Coils Coil 285 305 - -
Aev09g1403 637 MobiDBLite consensus disorder prediction 433 452 - -
Aev09g1403 637 PANTHER - 17 627 - -
Aev09g1403 637 MobiDBLite consensus disorder prediction 373 415 - -
Aev09g1403 637 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 17 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1403 Aev-Chr9 17999161 18002067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1403 1 561 Trihelix Transcription Factor Family AT5G28300 37.540 9.83e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev09g1403 Myb_DNA-bind_4 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1403 - - ahf:112775947 565.844