Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1385 ATGGATTTCCAGGGATTTCTAAACGACTTGCAGGATTGGGAAATTTCTCGAAAAGACAAAGCTCGACTAATGAAGTCTACTAAGGAAAATGGTGTGGGTGTGGAGAAGGCATCAAGAGGAGATACTATCTCTCTTGATAATGCAAGAGGTACTTCAGGAAAGTATGATTTCTCTAGAAATAATGACCCACTCAGTCGTGTGCGGAGTAGTTTTGTTTCTGAAGACGTACCAGATGCTTCGTCGGAGAAAGATCTGGGTAATGAGTTTTTCAAGCAGAAAAAGTTTAAGGAAGCTACTGACTGCTATTCTAGAAGCATTGCCTTGTCACCTACAGCTGTAGCATATGCAAATAGGGCAATGGCCTATATCAAGCTCAGAAGATTTGAAGAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTCGATGATCGTTACATAAAAGCATACTCACGCCGAGCAACATGTAGAAAAGAACTTGGAAAATTTATAGAATCCATGGAAGATGCTGAGTTTGCCTTGGGGTTGGAACCTAACAATCAAGAAGTCAAAAAACAGTATGCTGATGCCAAGTCTTTGTATGAAAAGGAAATTCTTCATAAAGTATCCGGGGCTCTTAGAAGCAGTGGACAAGGAAATAAAAAAGTAGGGAAATCAGATACACAAGTTAATGGAGGCAGCATCCACCCTATTTCAAATGTCACACAAAAGTCAAGGGCTGCTGAAGTTCATAAACACACAAAGGATAAACAGTCAAAAATTCTTGCTAAAGAATCACACTTAATGGAAGAGGTAGATAGCAAGGATACAAAAGTGAGAAGCACGACTCAGGGACAACAATTGGATGGTTCTAAGGATGGTTCTAGTGCAAGCGACAGTGTGCAGCATATTAAGAGAAATCACAGAATTGGTAAGCAAGAAATGACACCATCTGTTCAACATCTTGCTTCTCGTGCAGCTTCTCTAGCAATGGCTGAAGCTGCAAAGAACATAGTACCACCAACTACAGCATATCAGTTTGAGGTCTCTTGGAGAGGGTTTTCAGGTGACCGGGCATTGCAGTCTCGCTTATTAAAGGCCATATCTCCTCATGAATTACCAAAAATATTAAAAAATGCTTTGTCTACTGACCTGCTAATCAACATCGTCAAGTGTGTTGCATCCTTTTTCATTGAAGACATGGATCTCGCTGTCAGTTATATGGAGCATTTGACCAAGGTACCAAGATTTGACATGATCGTAATGCTCCTTCCATCAGTAGATAAGGATGAATTGCGCAAAATCTGGGATGAAGTGTTCTGCTGCGAAGCAACTCCAATGGAGTATGCAGAGATTCTGGACAACCTGCGATCAAAATACTGCCTTGGACAAGTGGTTGAATGTGATTTCGCACATGGAGTTTGGGTGAAAATTGAAGAATACTTTGCAACTAGGGTTAAATCGAAGATTAAGCAATTGAAAGCTCAGTTGAAGGGAATCAAGAAACAAGGATCTGCATCAGAATACCTTTTAATAATCAAGAAAATCACAAATATGTTAGCTTGTTTAGGAGCTCCAATCTCCATAGAAGATCACATTGAAGTAATTGTTGATGGACTCACCGAAGAGTATAGTCCTCTGATCACTTTGGTAACGGCACAATCTGAAACTATTTCTATTAGCGAAGTTGAATCTTTGGTGCTGGCTCAAGATGACATCGTCATAGAAAAGTTCAGAAATATAGATCTTGGATTTATGCAAGTGAATCTTGCACACAACAATTGTCATAACCCAGAAAATGAGATGCGCTATGGCAGGAGTCAGTGCTTAAGAGGACTTAGTCGTTGCAGAGGACAAAGAGGAGGACGCCTCTGGACATCTAGTGGAAGATATCAGTGCCAATTATGTGGAAAGCTTGGGCATACAGTGTGGCAATGTTGTCACATGTTTGATCAATCTTTTTCAAATCCACAAAAAGATGGCATCAACCCAACCTCCTCTTCCACGTAG 1986 0.4063 MDFQGFLNDLQDWEISRKDKARLMKSTKENGVGVEKASRGDTISLDNARGTSGKYDFSRNNDPLSRVRSSFVSEDVPDASSEKDLGNEFFKQKKFKEATDCYSRSIALSPTAVAYANRAMAYIKLRRFEEAEDDCTEALNLDDRYIKAYSRRATCRKELGKFIESMEDAEFALGLEPNNQEVKKQYADAKSLYEKEILHKVSGALRSSGQGNKKVGKSDTQVNGGSIHPISNVTQKSRAAEVHKHTKDKQSKILAKESHLMEEVDSKDTKVRSTTQGQQLDGSKDGSSASDSVQHIKRNHRIGKQEMTPSVQHLASRAASLAMAEAAKNIVPPTTAYQFEVSWRGFSGDRALQSRLLKAISPHELPKILKNALSTDLLINIVKCVASFFIEDMDLAVSYMEHLTKVPRFDMIVMLLPSVDKDELRKIWDEVFCCEATPMEYAEILDNLRSKYCLGQVVECDFAHGVWVKIEEYFATRVKSKIKQLKAQLKGIKKQGSASEYLLIIKKITNMLACLGAPISIEDHIEVIVDGLTEEYSPLITLVTAQSETISISEVESLVLAQDDIVIEKFRNIDLGFMQVNLAHNNCHNPENEMRYGRSQCLRGLSRCRGQRGGRLWTSSGRYQCQLCGKLGHTVWQCCHMFDQSFSNPQKDGINPTSSST* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1385 661 PANTHER OS05G0129900 PROTEIN 1 455 - -
Aev09g1385 661 MobiDBLite consensus disorder prediction 271 293 - -
Aev09g1385 661 MobiDBLite consensus disorder prediction 204 293 - -
Aev09g1385 661 SMART tpr_5 113 145 IPR019734 GO:0005515
Aev09g1385 661 SMART tpr_5 79 112 IPR019734 GO:0005515
Aev09g1385 661 SMART tpr_5 146 179 IPR019734 GO:0005515
Aev09g1385 661 SUPERFAMILY TPR-like 73 191 IPR011990 GO:0005515
Aev09g1385 661 Pfam Potential Monad-binding region of RPAP3 332 421 IPR025986 -
Aev09g1385 661 MobiDBLite consensus disorder prediction 205 237 - -
Aev09g1385 661 Pfam Tetratricopeptide repeat 112 142 IPR001440 GO:0005515
Aev09g1385 661 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Aev09g1385 661 Gene3D Tetratricopeptide repeat domain 72 216 IPR011990 GO:0005515
Aev09g1385 661 MobiDBLite consensus disorder prediction 238 270 - -
Aev09g1385 661 Coils Coil 475 495 - -
Aev09g1385 661 Pfam gag-polypeptide of LTR copia-type 454 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1385 Aev-Chr9 17755061 17766990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1385 83 175 U-box Gene Family AT3G07370 32.979 1.08e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1385 K23002 - gmx:100784528 650.973