Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1362 ATGCCAGTGCCAAAATACTATTGTGATTATTGTGATAAGCAGTTCCAAGACACACCAGGAGAACGCAAACGACATGAACGGGGCATTCAGCACCAACAAGCCAAAGCTCGCTGGTATGATTCCTTCAAACTTGAAGAAAAAGTACAGCAACAGCATCATTCTAATGCACGGTCATCTCAAGGATCACCTAAACCTCTTTGCTACCATTTTGTCAACTCTGGATTTTGTCGTTTCGGTGAATCCTGCATATATTTTCATCCCAGTGCTAATAATGTACCGCAACCATCAATGATAAGCGCGCCCAATATGCCACAACCATCAATGATGAGCACACTCAACAATATGGCGCAACCATCAATGCTGAGTGCTCCCTTCAATATGCCGCAACCATCAATGATGAGTGCCTCCTTCAATATGCTGCAGCTATCAATGATGAGCGTATCCAACAATATACTGCAATCATCAATGATAAACACACCTACTACCAAAGAGACTCTGGTACAAGATCGTATGGGGATGTCATGGGAGAATCTGCCTCCATCATTGCATCCTCCACCTGAGGGTGGATATCCCTCTCTTTCGTTTGTGGATTGGGGATAG 600 0.4417 MPVPKYYCDYCDKQFQDTPGERKRHERGIQHQQAKARWYDSFKLEEKVQQQHHSNARSSQGSPKPLCYHFVNSGFCRFGESCIYFHPSANNVPQPSMISAPNMPQPSMMSTLNNMAQPSMLSAPFNMPQPSMMSASFNMLQLSMMSVSNNILQSSMINTPTTKETLVQDRMGMSWENLPPSLHPPPEGGYPSLSFVDWG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1362 199 Gene3D Classic Zinc Finger 3 60 - -
Aev09g1362 199 SMART c3hfinal6 62 88 IPR000571 GO:0046872
Aev09g1362 199 SUPERFAMILY CCCH zinc finger 65 88 IPR036855 GO:0046872
Aev09g1362 199 Pfam U1 zinc finger 4 39 IPR013085 GO:0008270
Aev09g1362 199 SUPERFAMILY beta-beta-alpha zinc fingers 3 51 IPR036236 -
Aev09g1362 199 PANTHER NUCLEASE-RELATED 1 199 - -
Aev09g1362 199 ProSiteProfiles Zinc finger C3H1-type profile. 61 89 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev09g1362 zf-U1 2e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1362 K13152 - cit:102629954 149.828