Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1356 ATGGGAAGAACGAATAAAGATGCTGCGGCAAATAGCAGTGACTGCCCTGAATCAGCTCTTGCTAATTCGAGTGGTGAACATCCAGAGGATCCTACTGTACACTGCCAGAAGGTTGTGGAACAATCCAAGGATGATTTTAAACCATTGGAGCCAAAATCTGTTGAACAAAATGTTGTAGCTTCTAAACAGTTAGACCCTGCTTGCAAAGAGAAAGTCACCAAGATTGATCAAACTTCCATTCAAATTCATGGGGAAAATGGGGCTAAAGGACAGATGACTGGTGACAAAAGTATGGAGCTAGCAGTAGCCTCTTCCTCTGTTGGTTCTGGTAATTGTGCAGACAGAGGTTCAGAAGAACCAAATCAAAATTTGAAGCGAAAAAATCAAGACACCGAGGACTCTGAGTGCCATAGTGATGATGTTGAGGAAGAATCTGTTGGTGTTAAAAAGGCAGTTGCAGGGCGAGGAGCTACCAGTTCCAAGAGAAGCCGTGCAGCTGAAGTGCATAATCTATCAGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATACGTGCATTACAAGAACTCATACCAAATTGCAATAAGGTGGATAAAGCTTCAATGCTGGATGAGGCTATTGAGTATCTTAAAACACTTCAGATCCAAGTTCAAATTATGTCAATGGGAGCCGGTCTATATATGCCTCCAATGATGTTACCTCCAGGAATGCAGCATATGCATGTTCCACACATGGCTCCTTTTTTGCCTATGGGTATGGGGATGCAAATGAGGTTGGGTATGGCTTATGGGATGAGTATGCCTGACATGAATGGTGTATCTTCAAGATTTCCAATGATTCAGGTGCCCCAAATGAAAGGAACTCATCTCCCTGGTGCACATATAATGGCCAGATCAAATCCACAAGGGAGGGCCTCTTATGAATTCATCAGCCCCAGTACTACATACCTGCGGAACAACAGGCTCATTCAAATTGTGGATCCGGCTTCAACATCTAGCTTAGTAAATACAATGCCCGGTGCGGACCCACACGTTAAGCAAAGTACTAATGGCTGCGACCCAACTGGTCAGATGCCTACCCAGTGTGAAGCAGCAACTGTTGGTAATTCTGATAGTGGAACTGGTAATCCTGTCAATGAAGATGACCAAGTGATTGGTTATGATTGA 1167 0.4396 MGRTNKDAAANSSDCPESALANSSGEHPEDPTVHCQKVVEQSKDDFKPLEPKSVEQNVVASKQLDPACKEKVTKIDQTSIQIHGENGAKGQMTGDKSMELAVASSSVGSGNCADRGSEEPNQNLKRKNQDTEDSECHSDDVEEESVGVKKAVAGRGATSSKRSRAAEVHNLSERRRRDRINEKIRALQELIPNCNKVDKASMLDEAIEYLKTLQIQVQIMSMGAGLYMPPMMLPPGMQHMHVPHMAPFLPMGMGMQMRLGMAYGMSMPDMNGVSSRFPMIQVPQMKGTHLPGAHIMARSNPQGRASYEFISPSTTYLRNNRLIQIVDPASTSSLVNTMPGADPHVKQSTNGCDPTGQMPTQCEAATVGNSDSGTGNPVNEDDQVIGYD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1356 388 MobiDBLite consensus disorder prediction 344 379 - -
Aev09g1356 388 SMART finulus 170 219 IPR011598 GO:0046983
Aev09g1356 388 MobiDBLite consensus disorder prediction 1 20 - -
Aev09g1356 388 Coils Coil 170 190 - -
Aev09g1356 388 MobiDBLite consensus disorder prediction 344 388 - -
Aev09g1356 388 CDD bHLH_AtPIF_like 164 226 - -
Aev09g1356 388 Gene3D - 159 222 IPR036638 GO:0046983
Aev09g1356 388 MobiDBLite consensus disorder prediction 101 118 - -
Aev09g1356 388 PANTHER TRANSCRIPTION FACTOR PIF3 2 360 - -
Aev09g1356 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 226 IPR036638 GO:0046983
Aev09g1356 388 MobiDBLite consensus disorder prediction 30 51 - -
Aev09g1356 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Aev09g1356 388 MobiDBLite consensus disorder prediction 101 144 - -
Aev09g1356 388 MobiDBLite consensus disorder prediction 1 64 - -
Aev09g1356 388 MobiDBLite consensus disorder prediction 119 134 - -
Aev09g1356 388 Pfam Helix-loop-helix DNA-binding domain 168 214 IPR011598 GO:0046983
Aev09g1356 388 PANTHER TRANSCRIPTION FACTOR PIF3 2 360 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1356 Aev-Chr9 17451757 17454628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1356 95 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 69.388 2.37e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g1356 HLH 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1356 K12126 - gmx:100794974 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1356 09 17451757 17454628 Aev09g1356 09 17451757 17454628 ECH