Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1351 ATGGGGATTGAGATCGTGGAGCCTAACACGTGCTTCAGGGGTTGCTGCACTAGCTCCTCTATTCCTCTACATCTTTCTCCTTCTTCTTATACCCTCCTCTCACCAATTGCACGAGGCGCAGAAAGTGTTGTATATGAAGGGACTTTGGATGGCAAGAAGGTTGCGGTGAAGAAACCTATCTTATCAATTTCAGAAGACATTGATAAGTTTCACAAAGAATTGCAATTGCTATGCAAGCTAGATCACCCGGGATTAGCAACATTAATTGCCGCCCATGCCAAGCCACCCAATTACCTGTTTTTCTTCAAGTTCTATGAATCTCTGAATCTTGCACAGAAGTTACATGTGGAAGAATGGACTCCGACTATCAATCATGCACTGATAATAATAATGCAACTAGCAAATGCATTGCAATATCTCCACAATCTCGGGGTTGTACATAGAGATGTAAAACCAGCAAATATCCTGCTTGACGAAAATCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAGTACAAGATTGATCTTAAGGGAGTTTCTATTGAGAATTGGAAGTCTAGTGGAAAGCCAACCGGTGGTTTTCACAAAAAGAACATGGTGAGAGGGAGTGTTAATGGCACAGAGGTGGTGGTGGTGGATACAGGGGCTGATTGTAACTTCATTGACGCTCGGATGGCAGAGTTACTCAGGGTGGGAACTATCCCAATACCATTCCAAGTAGAATTGGGGTCAGGGCAAGTGGATCAAGGTGAAGGATTGTGTGAGAATGTGGAGCTTGTTATTCAGGGCAATGAGATCGTTCAACCCTTCTTTAAGCTTAGTTTGGGCAGCACTGATGTAGTATTGGGTTATGGGTGGATAGCTGGACTTGGAGACATCAGGGCAAATTTTGGGAAACATCACATTGAATGGAAGGAAGGAGCTGAGTGGAAGGGCATTCAAGGGGACCCTTCCTTGTGCACCTCCAAAACACAAATGAAGAAAGTATTTCAAGCATTGAGGGCTGAAGGGGAGGCTTATTTCATTACTGCAGAAGAAGGGAGTTCTCATCCTGAATCTGCAAAGGAGGAGGGAGTACCTGAGGGAATTAAGGAGCTGTTGAAAAGGAAGATTCTTCACTCAAACTTTTGCCTTCATGTTGATAAATTTCCTTCTTCACTTGCTCAATCATAG 1176 0.4371 MGIEIVEPNTCFRGCCTSSSIPLHLSPSSYTLLSPIARGAESVVYEGTLDGKKVAVKKPILSISEDIDKFHKELQLLCKLDHPGLATLIAAHAKPPNYLFFFKFYESLNLAQKLHVEEWTPTINHALIIIMQLANALQYLHNLGVVHRDVKPANILLDENLCPHLTDFGLAEYKIDLKGVSIENWKSSGKPTGGFHKKNMVRGSVNGTEVVVVDTGADCNFIDARMAELLRVGTIPIPFQVELGSGQVDQGEGLCENVELVIQGNEIVQPFFKLSLGSTDVVLGYGWIAGLGDIRANFGKHHIEWKEGAEWKGIQGDPSLCTSKTQMKKVFQALRAEGEAYFITAEEGSSHPESAKEEGVPEGIKELLKRKILHSNFCLHVDKFPSSLAQS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1351 391 Pfam Retroviral aspartyl protease 209 289 - -
Aev09g1351 391 CDD PKc 36 171 - -
Aev09g1351 391 Gene3D Acid Proteases 199 312 IPR021109 -
Aev09g1351 391 Gene3D Transferase(Phosphotransferase) domain 1 17 191 - -
Aev09g1351 391 SMART serkin_6 30 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1351 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Aev09g1351 391 SUPERFAMILY Protein kinase-like (PK-like) 17 174 IPR011009 -
Aev09g1351 391 ProSiteProfiles Protein kinase domain profile. 30 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1351 391 Pfam Protein kinase domain 30 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g1351 391 PANTHER - 1 202 - -
Aev09g1351 391 CDD retropepsin_like 201 289 - -
Aev09g1351 391 PANTHER PROTEIN PHOSPHATASE 2C 1 202 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1351 Aev-Chr9 17339579 17348473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1351 99 201 PP2C-type Phosphatase Gene Family AT2G40860 69.903 1.90e-46 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Aev09g1351 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1351 - - vun:114166829 369.007