Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1346 ATGGGTATCAAGGGTTTAACAAAGCTTCTTGCTGACAATGCCCCGAAAGCCATGAAAGAGAACAAATTCGAGAGCTACTTTGGCCGAAAGATCGCCATTGATGCCAGCATGAGCATTTACCAGTTCCTTATTGTGGTGGGAAGAAGTGGAACTGAAATGCTCACTAATGAAGCTGGTGAAGTTACTAGTCACTTGCAAGGCATGTTTAATCGCACCATCAGACTTCTAGAAGCTGGGATGAAGCCAGTATATGTTTTTGATGGGCAGCCACCAGATTTGAAGAAACAAGAACTTGCAAAACGTTTGTCGAAGAGGACTGAGGCAAAGGAGGATTTGTCTGAAGCTATTGAGAGTGCCAACAAGGAAGACATTGAAAAATTCAGCAAAAGGACAGTCAAGGTGACAAAGCAGCATAATGAAGACTGCAAAAGACTTTTAAGACTTATGGGAGTGCCCGTCATTGAGGCACCATCGGAAGCAGAGGCTCAGTGTGCTGCTCTTTGCAAGGCTGGAAAGGTTTATGGTGTTGCTTCTGAAGACATGGACTCTTTAACATTTGGAGCTCCTAAGTTTCTTCGCCATTTAATGGATCCTAGCTCCAAGAAAGTTCCAGTAATGGAATTTGAAGTTGCCAAGATTTTGGAGGAGCTTAATTTGACCATGGACCAATTTATTGACTTGTGCATTCTTTCTGGATGTGATTATTGTGAAAGCATTCGAGGGATTGGGGGAACAACAGCTTTGAAGCTCATACGTCAACATGGCTCTATTGAAAGTATACTGGAGAACATAAACAAAGAGAGGTACCAGATACCGGATGATTGGCCATATCAGGAGGCTCGGCAGCTTTTTAAAGAGCCACTGGTCATAACCAACGATGAGGAACTTAATCTCAAGTGGTCAGCTCCAGATGAAGAAGGATTGATAACATTTCTGGTAAATGAGAATGGATTCAACAGTGATAGGGTGACAAAGGCAATAGAAAAAATTAAAGCGTCGAAGAATAAGGCATCACAGGGTCGATTGGAATCATTCTTTAAACCTGCTGCAAATCCATCCGTACCTATTAAAAGGAAGGAAAGCAAATGCTTGCTTAGGTCTTTCAAACCAGCAGTTGAGCATAAGATGTTCACTCTGCAACTTTATAACTGGTCAAAGCCTGCGGCTTTTGGCAAGTTGAGCTTTCCAATTCACCATCTGGGTTCTGAGCACTCTGTGCCACTGTATAGAAGTGTCAGCTTTGGCGTCTGA 1251 0.4285 MGIKGLTKLLADNAPKAMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGMKPVYVFDGQPPDLKKQELAKRLSKRTEAKEDLSEAIESANKEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAQCAALCKAGKVYGVASEDMDSLTFGAPKFLRHLMDPSSKKVPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCESIRGIGGTTALKLIRQHGSIESILENINKERYQIPDDWPYQEARQLFKEPLVITNDEELNLKWSAPDEEGLITFLVNENGFNSDRVTKAIEKIKASKNKASQGRLESFFKPAANPSVPIKRKESKCLLRSFKPAVEHKMFTLQLYNWSKPAAFGKLSFPIHHLGSEHSVPLYRSVSFGV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1346 416 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 224 239 IPR006084 -
Aev09g1346 416 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 146 163 IPR006084 -
Aev09g1346 416 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 82 101 IPR006084 -
Aev09g1346 416 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 42 IPR006084 -
Aev09g1346 416 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 167 187 IPR006084 -
Aev09g1346 416 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 379 IPR006084 -
Aev09g1346 416 Coils Coil 102 122 - -
Aev09g1346 416 Gene3D - 2 218 - -
Aev09g1346 416 Pfam XPG I-region 150 234 IPR006086 GO:0004518
Aev09g1346 416 SMART HhH_4 221 254 IPR008918 GO:0003677|GO:0003824
Aev09g1346 416 CDD PIN_FEN1 4 332 - -
Aev09g1346 416 Gene3D - 219 286 - -
Aev09g1346 416 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 219 353 IPR036279 -
Aev09g1346 416 SMART xpgn3 1 108 IPR006085 GO:0004518
Aev09g1346 416 CDD H3TH_FEN1-Euk 222 290 - -
Aev09g1346 416 ProSitePatterns XPG protein signature 2. 150 164 IPR019974 GO:0016788
Aev09g1346 416 Hamap Flap endonuclease 1 [fen]. 1 347 IPR023426 GO:0016788
Aev09g1346 416 SMART xpgineu 147 219 IPR006086 GO:0004518
Aev09g1346 416 PANTHER FLAP ENDONUCLEASE 1 1 379 - -
Aev09g1346 416 SUPERFAMILY PIN domain-like 2 234 IPR029060 -
Aev09g1346 416 Pfam XPG N-terminal domain 1 108 IPR006085 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1346 Aev-Chr9 17290197 17294423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1346 1 384 Core DNA Replication Machinery Family AT5G26680 82.812 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1346 K04799 - zju:107411672 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1346 09 17290197 17294423 Aev09g1346 09 17290197 17294423 ECH