Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1342 ATGAAGGGGAAGATAGTAGTCTCCGCCGTTTGTCTCATCCTCGTGGTAGGTGTGGTCATCGGTGCCGTGGTTGTTCACAACAACAATCAGAGCAAATCTAACAGTTCAGATGAAAAGCCTAATAACACAAACGCCGTCGTTTTGAGAATATGCCAAAACACACAAGATCAAAAGCTTTGCCAAGATACCTTGAGCTCTGTGACTGACACCACTGATCCCAAAGCTTACATCGCCGCCTCGGTGAAAGCCGTCACTGAGAGCGTCATCAAGGCCCTCAACATGAGCGACAAGTTAACAGTACACGAAAGCAACATGGACTCAGGCCTGAAGATGGCTCTTGACGACTGCAAGGACTTGTTGGAATCCGCCATGGACAGTCTCTCACTCACCACCAACATGGTAGGAGACAGCAACATCAAGGCAGTGCACGACAGGTCCTCCGACTTCAAGAACTGGTTGAGTGCTGTCATCTCCTACAGCCAAGCCTGCTCCGACAGCTTCGACGCCAACAAGGACGGCGAGAAAGCAATCATGGATCAGCTTAACGCCCAAAGCCTCGATAATATCGGCAAAACTACCGGAATTGCCCTTGACATTGTCTCCGATTTGTCCAACATCCTCTCCGCCTTCAACTTGAAGGTTGATTTGAAGCCCGCTTCTCGCCGCCTCCTAGCTCTTGACGTCGATGATGAAGGACTCCCTGTATGGTTGTCCCATTCAGATCGCCAGCTCTTGGGAATCCAAAAGAAGGTAATCAAAAAGGTTGTTGGTAAGAAGGGTGGCAAAGGAAAGAATAAGGCTGTCGCCGCCGCCGCAGGTGCTGCCGCTGGTGTTGCCTTTGCCGGGTCTATTGTGCCGGCATCACCACAGGCACCTAATGTGGTGGTTGCCAAGGACGGAAGTGGCAATTTCAAGACTGTCAAGGAAGCTATTGACTCCTATCCTGCTGGTTTCAAGGGCAGATATGTTATCTATGTTAAGGCTGGTCTCTATAATGAGTACATCATAGTTCCTAAAACCTCTGTAAACATTCTCATGTACGGTGATGGCCCTACAAGGACCATTATCACTGGCAACAAGAACTTCGCTAATGGCGTCAAGACAATGAACACAGCCACTTTCGCCAACACCGCAAATGGATTCATTGCCAAGTCAATCAGGTTTGAGAACACCGCTGGTCCCAATGGTCACCAAGCCGTGGCACTCCGCAACCAGGGAGACATGAGTGCTTTCTTCGACTGCCACATCCTCGGCTATCAAGACACCTTGTACACCCAAACCAACAGGCAATTCTACCGCAACTGCGAGATCTCCGGCACCATCGACTTCATCTTCGGCGTCTCCCCAACACTCATCCAGAACAGCAAGATCATCGTCAGGAAGCCCAACCCCAACCAGTTTAACACCGTCACCGCCGACGGCACAAGCCAACAGAACATGGCCACCGGCATTGTCCTCCAGAACTGCGACTTTGTCGCCGAGCCAGCCCTATTCCCAGTAAGATCCCAATACAAGTCATACTTGGGTAGGCCATGGAAGGCATACGCCAAGACCTTGGTTATGGAATCTGTTATTGATGACTTCCTTCACCCAGAAGGATGGACTCCTTGGGCCGGTAGCCAGTTCCTTGACACTTTGTACTATGCTGAGTATGCCAATAGTGGACCTGGTGCCAATACCTCAGGAAGGATCAAGTGGAAGGGTTACCGCCCAAGCATTAGCTCCGCTGAGGCTGCCAAGTTCACAGCTGCTCAATTCCTTAAAGGTGGAGCCACCAGCACTGCTGAGCAATGGTTGGCTGCTACTGGCGTTCCTTTCGCCGTTGGCTTCACCAAAGCTTAA 1842 0.5081 MKGKIVVSAVCLILVVGVVIGAVVVHNNNQSKSNSSDEKPNNTNAVVLRICQNTQDQKLCQDTLSSVTDTTDPKAYIAASVKAVTESVIKALNMSDKLTVHESNMDSGLKMALDDCKDLLESAMDSLSLTTNMVGDSNIKAVHDRSSDFKNWLSAVISYSQACSDSFDANKDGEKAIMDQLNAQSLDNIGKTTGIALDIVSDLSNILSAFNLKVDLKPASRRLLALDVDDEGLPVWLSHSDRQLLGIQKKVIKKVVGKKGGKGKNKAVAAAAGAAAGVAFAGSIVPASPQAPNVVVAKDGSGNFKTVKEAIDSYPAGFKGRYVIYVKAGLYNEYIIVPKTSVNILMYGDGPTRTIITGNKNFANGVKTMNTATFANTANGFIAKSIRFENTAGPNGHQAVALRNQGDMSAFFDCHILGYQDTLYTQTNRQFYRNCEISGTIDFIFGVSPTLIQNSKIIVRKPNPNQFNTVTADGTSQQNMATGIVLQNCDFVAEPALFPVRSQYKSYLGRPWKAYAKTLVMESVIDDFLHPEGWTPWAGSQFLDTLYYAEYANSGPGANTSGRIKWKGYRPSISSAEAAKFTAAQFLKGGATSTAEQWLAATGVPFAVGFTKA* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1342 613 PANTHER PECTINESTERASE 3 271 - -
Aev09g1342 613 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 204 IPR035513 -
Aev09g1342 613 ProSitePatterns Pectinesterase signature 2. 437 446 IPR033131 -
Aev09g1342 613 PANTHER PECTINESTERASE 278 611 - -
Aev09g1342 613 PANTHER PECTINESTERASE 3 271 - -
Aev09g1342 613 Gene3D - 288 610 IPR012334 -
Aev09g1342 613 CDD PMEI-like_3 50 205 - -
Aev09g1342 613 PANTHER PECTINESTERASE 278 611 - -
Aev09g1342 613 SUPERFAMILY Pectin lyase-like 289 606 IPR011050 -
Aev09g1342 613 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 200 IPR006501 GO:0004857
Aev09g1342 613 Pfam Plant invertase/pectin methylesterase inhibitor 49 199 IPR006501 GO:0004857
Aev09g1342 613 SMART PMEI_2 42 199 IPR006501 GO:0004857
Aev09g1342 613 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 205 IPR035513 -
Aev09g1342 613 Pfam Pectinesterase 293 589 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1342 Aev-Chr9 17241079 17244803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1342 5 610 Carbohydrate Esterase AT3G05610 37.213 1.24e-133 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1342 K01051 - gmx:100775246 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1342 09 17241079 17244803 Aev06g0692 06 4744720 4747422 PCT