Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1341 ATGACGAAAGGTAAAGTGCTTGTATCTAGTGTTTCCCTCATCCTCGTGGTTGGTGTTGCAATAGGTGTTGTTGTTGTTGTAAATAACAATAAGAAGGACAATGGTAGTCCTGAGGTAATAGAACATCAAAAGTCAGTGAATGCCATGTGCCAGGACACCCAAGACACCAAGCTTTGCCAAGATACCCTTAACAATGTGCCACCGTCCTCCGCATCGGACCCTAAGGCTTACATAGCAGCTGCAGTAGAAGCAAGCACAAAAAGCGTGATTCATGCCTTAAACATGAGTGATAGGCTCTCAGTGGATCATGGCAACAAAAATCCGGGCATCAAGATGGCCCTTGATGATTGTAAGGACTTGTTGGAGTTCGCTATGGACAGCCTAGAGTCCTCGTCAAACTTAGTCCGTGACAACAACATCCAAGCAATGAACGAACAAATCCCTGACTTTAGGAATTGGCTTAGTGCTGTCATCTCGTACCAACAATCATGCATGGAAGGTTTTGATGATAGTAAAGACGGTGAAGCCCAAGTAAAGGAGCAATTGAACCAACAAAGCTTAGACCAAATGGGGAAGCTCACAGGAATTACTCTTGATATTGTCACTGGCTTGTCGAAAATCCTTGAGAATCTTGGAATGAACCTGGATTTGAAACCTGCATCTCGTCGCCTCATGGAGGCGGAGGAGACCGATGGAGAAGGGCTCCCTACTTGGATCTCCACATCGGATCGCAAGCTCTTGGGTAAGATTCATAAAGGAGGTGCTGGTGGCGGCGGTGGCGGTGGCGGTGGTGGTCCACAGGTGACTCCGAATGCAGTGGTTGCCAAGGATGGTAGTGGTCAGTTTAAAACCATTCAAGCTGCTATTGCCTCGTACCCTAAAGGCTTCAAAGGAAGATACATTATCTATGTCAAGGCTGGGGTGTATGCTGAATACATTACAATTCCTAAAGCAGCAGCCAACATTCTTATGTATGGTGATGGCCCAACAAAGACGATTGTCACTGGTAACAAAAACTTTGTAGATGGTGTGAAGACAATGCAAACTGCAACCTTCGCCAACACCGCACCTGGGTTCATTGCCAAGTCAATGGCATTCGAGAACACTGCAGGTCCAGCAAAACACCAAGCAGTTGCATTCCGAAACCAAGGAGACATGTCAGCCTTCTTCGATTGCGCCATGCACGGTTACCAGGATACCTTGTATGCCCAAGCCAACCGCCAATTCTACCGCAACTGCGAAATCTCCGGCACCATAGACTTTATTTTTGGCACATCCCCAACCTTGATCCAAAGCTCCAGAATCATTGCAAGAATGCCAGGCCCTAACCAATTCAACACACTCACTGCAGATGGTACGAGCCAAAAGAACATGGCCACAGGGATTGTGCTCCAAAACTGTGACATCATTCCAGAGCCTGCCCTGACCCCAGCTCGATTACAAGTCAAATCGTATCTTGGTAGGCCATGGAAGGCCTATGCTAGAACCGTTATTATGGAATCCAATATTGGTGACTTTATTCAACCAGATGGGTGGAGTGTTTGGAGTGGGAATCAGTTCCTTGACACTTTATACTATGCTGAGTATGCAAATGTTGGAGCCGGTGCTAATGTCCAGAGAAGGGTTAGATGGAAGGGTTACCATCCAAACATTAGTAAAGATCAAGCTGCAATGTTCACTGTTGGCCAATTCCTCAGAGCTGGACCTGCTGGAACAGCTACGGATTGGTTGACAGCTTCTGGTGTTCCATTTGCCATTGGCTTCACCAAAACTTGA 1776 0.4679 MTKGKVLVSSVSLILVVGVAIGVVVVVNNNKKDNGSPEVIEHQKSVNAMCQDTQDTKLCQDTLNNVPPSSASDPKAYIAAAVEASTKSVIHALNMSDRLSVDHGNKNPGIKMALDDCKDLLEFAMDSLESSSNLVRDNNIQAMNEQIPDFRNWLSAVISYQQSCMEGFDDSKDGEAQVKEQLNQQSLDQMGKLTGITLDIVTGLSKILENLGMNLDLKPASRRLMEAEETDGEGLPTWISTSDRKLLGKIHKGGAGGGGGGGGGGPQVTPNAVVAKDGSGQFKTIQAAIASYPKGFKGRYIIYVKAGVYAEYITIPKAAANILMYGDGPTKTIVTGNKNFVDGVKTMQTATFANTAPGFIAKSMAFENTAGPAKHQAVAFRNQGDMSAFFDCAMHGYQDTLYAQANRQFYRNCEISGTIDFIFGTSPTLIQSSRIIARMPGPNQFNTLTADGTSQKNMATGIVLQNCDIIPEPALTPARLQVKSYLGRPWKAYARTVIMESNIGDFIQPDGWSVWSGNQFLDTLYYAEYANVGAGANVQRRVRWKGYHPNISKDQAAMFTVGQFLRAGPAGTATDWLTASGVPFAIGFTKT* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1341 591 Gene3D - 265 588 IPR012334 -
Aev09g1341 591 CDD PMEI-like_3 48 206 - -
Aev09g1341 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 204 IPR006501 GO:0004857
Aev09g1341 591 ProSitePatterns Pectinesterase signature 2. 415 424 IPR033131 -
Aev09g1341 591 Pfam Pectinesterase 271 566 IPR000070 GO:0030599|GO:0042545
Aev09g1341 591 Pfam Plant invertase/pectin methylesterase inhibitor 45 200 IPR006501 GO:0004857
Aev09g1341 591 PANTHER PECTINESTERASE 4 589 - -
Aev09g1341 591 PANTHER PECTINESTERASE 4 589 - -
Aev09g1341 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 204 IPR035513 -
Aev09g1341 591 SUPERFAMILY Pectin lyase-like 268 584 IPR011050 -
Aev09g1341 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 205 IPR035513 -
Aev09g1341 591 SMART PMEI_2 41 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1341 Aev-Chr9 17211674 17215980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1341 44 588 Carbohydrate Esterase AT2G26450 39.416 6.55e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1341 K01051 - gmx:100775246 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0692 06 4744720 4747422 Aev09g1341 09 17211674 17215980 PCT
Aev09g1341 09 17211674 17215980 Aev06g0691 06 4740684 4742414 PCT